Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.53■■□□□ 1.2
VRK2Q86Y07 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VRK2Q86Y07 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VRK2Q86Y07 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
VRK2Q86Y07 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VRK2Q86Y07 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VRK2Q86Y07 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VRK2Q86Y07 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.52■■□□□ 1.2
VRK2Q86Y07 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
VRK2Q86Y07 AC020928.2-201ENST00000588717 2197 ntBASIC22.52■■□□□ 1.2
VRK2Q86Y07 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VRK2Q86Y07 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VRK2Q86Y07 MIR7108-201ENST00000614319 87 ntBASIC22.52■■□□□ 1.2
VRK2Q86Y07 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.52■■□□□ 1.2
VRK2Q86Y07 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
VRK2Q86Y07 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VRK2Q86Y07 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
VRK2Q86Y07 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
VRK2Q86Y07 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.51■■□□□ 1.19
VRK2Q86Y07 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VRK2Q86Y07 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.51■■□□□ 1.19
VRK2Q86Y07 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VRK2Q86Y07 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
VRK2Q86Y07 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VRK2Q86Y07 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.5■■□□□ 1.19
VRK2Q86Y07 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
VRK2Q86Y07 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VRK2Q86Y07 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VRK2Q86Y07 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VRK2Q86Y07 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VRK2Q86Y07 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VRK2Q86Y07 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.48■■□□□ 1.19
VRK2Q86Y07 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VRK2Q86Y07 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.48■■□□□ 1.19
VRK2Q86Y07 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VRK2Q86Y07 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
VRK2Q86Y07 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VRK2Q86Y07 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VRK2Q86Y07 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VRK2Q86Y07 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VRK2Q86Y07 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.47■■□□□ 1.19
VRK2Q86Y07 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
VRK2Q86Y07 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
VRK2Q86Y07 AC010501.1-201ENST00000606270 1962 ntBASIC22.47■■□□□ 1.19
VRK2Q86Y07 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.46■■□□□ 1.19
VRK2Q86Y07 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VRK2Q86Y07 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
VRK2Q86Y07 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.46■■□□□ 1.19
VRK2Q86Y07 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
VRK2Q86Y07 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VRK2Q86Y07 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
VRK2Q86Y07 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VRK2Q86Y07 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
VRK2Q86Y07 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VRK2Q86Y07 AC126177.7-201ENST00000547904 679 ntBASIC22.44■■□□□ 1.18
VRK2Q86Y07 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.44■■□□□ 1.18
VRK2Q86Y07 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VRK2Q86Y07 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRK2Q86Y07 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRK2Q86Y07 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
VRK2Q86Y07 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VRK2Q86Y07 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 AC135731.1-201ENST00000569415 2548 ntBASIC22.42■■□□□ 1.18
VRK2Q86Y07 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.42■■□□□ 1.18
VRK2Q86Y07 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRK2Q86Y07 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.41■■□□□ 1.18
VRK2Q86Y07 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VRK2Q86Y07 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.41■■□□□ 1.18
VRK2Q86Y07 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VRK2Q86Y07 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VRK2Q86Y07 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRK2Q86Y07 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRK2Q86Y07 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
VRK2Q86Y07 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRK2Q86Y07 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRK2Q86Y07 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VRK2Q86Y07 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
VRK2Q86Y07 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
VRK2Q86Y07 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.39■■□□□ 1.18
VRK2Q86Y07 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
VRK2Q86Y07 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VRK2Q86Y07 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
VRK2Q86Y07 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VRK2Q86Y07 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
VRK2Q86Y07 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.39■■□□□ 1.17
VRK2Q86Y07 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.39■■□□□ 1.17
VRK2Q86Y07 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VRK2Q86Y07 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.38■■□□□ 1.17
VRK2Q86Y07 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.38■■□□□ 1.17
VRK2Q86Y07 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VRK2Q86Y07 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.37■■□□□ 1.17
VRK2Q86Y07 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.37■■□□□ 1.17
VRK2Q86Y07 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms