Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atpaf1Q811I0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.09■□□□□ 0.49
Atpaf1Q811I0 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.09■□□□□ 0.49
Atpaf1Q811I0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atpaf1Q811I0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atpaf1Q811I0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Atpaf1Q811I0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Atpaf1Q811I0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atpaf1Q811I0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atpaf1Q811I0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atpaf1Q811I0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atpaf1Q811I0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atpaf1Q811I0 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.07■□□□□ 0.48
Atpaf1Q811I0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atpaf1Q811I0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atpaf1Q811I0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atpaf1Q811I0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atpaf1Q811I0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atpaf1Q811I0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Atpaf1Q811I0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.06■□□□□ 0.48
Atpaf1Q811I0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Atpaf1Q811I0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atpaf1Q811I0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atpaf1Q811I0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Atpaf1Q811I0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Atpaf1Q811I0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Atpaf1Q811I0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atpaf1Q811I0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atpaf1Q811I0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atpaf1Q811I0 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.04■□□□□ 0.48
Atpaf1Q811I0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atpaf1Q811I0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.04■□□□□ 0.48
Atpaf1Q811I0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atpaf1Q811I0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atpaf1Q811I0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atpaf1Q811I0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atpaf1Q811I0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atpaf1Q811I0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Atpaf1Q811I0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atpaf1Q811I0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atpaf1Q811I0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Atpaf1Q811I0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atpaf1Q811I0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atpaf1Q811I0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atpaf1Q811I0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atpaf1Q811I0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.02■□□□□ 0.47
Atpaf1Q811I0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.02■□□□□ 0.47
Atpaf1Q811I0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atpaf1Q811I0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atpaf1Q811I0 Gm30023-201ENSMUST00000197970 889 ntBASIC18.01■□□□□ 0.47
Atpaf1Q811I0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atpaf1Q811I0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Atpaf1Q811I0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Atpaf1Q811I0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atpaf1Q811I0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atpaf1Q811I0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atpaf1Q811I0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atpaf1Q811I0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Atpaf1Q811I0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atpaf1Q811I0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atpaf1Q811I0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atpaf1Q811I0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atpaf1Q811I0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atpaf1Q811I0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atpaf1Q811I0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Atpaf1Q811I0 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.99■□□□□ 0.47
Atpaf1Q811I0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atpaf1Q811I0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atpaf1Q811I0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atpaf1Q811I0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atpaf1Q811I0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atpaf1Q811I0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atpaf1Q811I0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atpaf1Q811I0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.97■□□□□ 0.47
Atpaf1Q811I0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atpaf1Q811I0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atpaf1Q811I0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Atpaf1Q811I0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atpaf1Q811I0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms