Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Usp6nlQ80XC3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Usp6nlQ80XC3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Usp6nlQ80XC3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Usp6nlQ80XC3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.7■■□□□ 1.54
Usp6nlQ80XC3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Usp6nlQ80XC3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Usp6nlQ80XC3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Usp6nlQ80XC3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Usp6nlQ80XC3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Usp6nlQ80XC3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp6nlQ80XC3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Usp6nlQ80XC3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Usp6nlQ80XC3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Usp6nlQ80XC3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
Usp6nlQ80XC3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.68■■□□□ 1.54
Usp6nlQ80XC3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Usp6nlQ80XC3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.67■■□□□ 1.54
Usp6nlQ80XC3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Usp6nlQ80XC3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Usp6nlQ80XC3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Usp6nlQ80XC3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Usp6nlQ80XC3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp6nlQ80XC3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Usp6nlQ80XC3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp6nlQ80XC3 Gm10232-201ENSMUST00000089221 720 ntBASIC24.65■■□□□ 1.54
Usp6nlQ80XC3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp6nlQ80XC3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Usp6nlQ80XC3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Usp6nlQ80XC3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Usp6nlQ80XC3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Usp6nlQ80XC3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Usp6nlQ80XC3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Usp6nlQ80XC3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Usp6nlQ80XC3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.63■■□□□ 1.53
Usp6nlQ80XC3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Usp6nlQ80XC3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Usp6nlQ80XC3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Usp6nlQ80XC3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Usp6nlQ80XC3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Usp6nlQ80XC3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Usp6nlQ80XC3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Usp6nlQ80XC3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Usp6nlQ80XC3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.61■■□□□ 1.53
Usp6nlQ80XC3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Usp6nlQ80XC3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Usp6nlQ80XC3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Usp6nlQ80XC3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Usp6nlQ80XC3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Usp6nlQ80XC3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.58■■□□□ 1.53
Usp6nlQ80XC3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Usp6nlQ80XC3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Usp6nlQ80XC3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Usp6nlQ80XC3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Usp6nlQ80XC3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.55■■□□□ 1.52
Usp6nlQ80XC3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Usp6nlQ80XC3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Etf1-202ENSMUST00000180351 108 ntBASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Usp6nlQ80XC3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.53■■□□□ 1.52
Usp6nlQ80XC3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Usp6nlQ80XC3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Usp6nlQ80XC3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Usp6nlQ80XC3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Usp6nlQ80XC3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.52■■□□□ 1.52
Usp6nlQ80XC3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Usp6nlQ80XC3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Usp6nlQ80XC3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Usp6nlQ80XC3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Usp6nlQ80XC3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Usp6nlQ80XC3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.5■■□□□ 1.51
Usp6nlQ80XC3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Usp6nlQ80XC3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Usp6nlQ80XC3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Usp6nlQ80XC3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.49■■□□□ 1.51
Usp6nlQ80XC3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Usp6nlQ80XC3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Usp6nlQ80XC3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Usp6nlQ80XC3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Usp6nlQ80XC3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.48■■□□□ 1.51
Usp6nlQ80XC3 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.48■■□□□ 1.51
Usp6nlQ80XC3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Usp6nlQ80XC3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Usp6nlQ80XC3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms