Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Csmd3Q80T79 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.61■□□□□ 0.09
Csmd3Q80T79 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Csmd3Q80T79 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Csmd3Q80T79 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Csmd3Q80T79 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Csmd3Q80T79 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Csmd3Q80T79 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Csmd3Q80T79 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.6■□□□□ 0.09
Csmd3Q80T79 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Csmd3Q80T79 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Csmd3Q80T79 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Csmd3Q80T79 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Csmd3Q80T79 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Csmd3Q80T79 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Csmd3Q80T79 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Csmd3Q80T79 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Csmd3Q80T79 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Csmd3Q80T79 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Csmd3Q80T79 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Csmd3Q80T79 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Csmd3Q80T79 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Csmd3Q80T79 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Csmd3Q80T79 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.57■□□□□ 0.08
Csmd3Q80T79 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Csmd3Q80T79 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Csmd3Q80T79 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Csmd3Q80T79 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Csmd3Q80T79 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Csmd3Q80T79 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Csmd3Q80T79 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Csmd3Q80T79 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.56■□□□□ 0.08
Csmd3Q80T79 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.56■□□□□ 0.08
Csmd3Q80T79 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Csmd3Q80T79 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Csmd3Q80T79 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Csmd3Q80T79 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Csmd3Q80T79 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Csmd3Q80T79 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Csmd3Q80T79 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.55■□□□□ 0.08
Csmd3Q80T79 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.55■□□□□ 0.08
Csmd3Q80T79 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.55■□□□□ 0.08
Csmd3Q80T79 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Csmd3Q80T79 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Csmd3Q80T79 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Csmd3Q80T79 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Csmd3Q80T79 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Csmd3Q80T79 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Csmd3Q80T79 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Csmd3Q80T79 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.53■□□□□ 0.08
Csmd3Q80T79 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.53■□□□□ 0.08
Csmd3Q80T79 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Csmd3Q80T79 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Csmd3Q80T79 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Csmd3Q80T79 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Csmd3Q80T79 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.53■□□□□ 0.08
Csmd3Q80T79 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Csmd3Q80T79 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Csmd3Q80T79 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Csmd3Q80T79 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.52■□□□□ 0.07
Csmd3Q80T79 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.51■□□□□ 0.07
Csmd3Q80T79 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.51■□□□□ 0.07
Csmd3Q80T79 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Csmd3Q80T79 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Csmd3Q80T79 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Csmd3Q80T79 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Csmd3Q80T79 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Csmd3Q80T79 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Csmd3Q80T79 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Csmd3Q80T79 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Csmd3Q80T79 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.5■□□□□ 0.07
Csmd3Q80T79 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Csmd3Q80T79 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Csmd3Q80T79 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.49■□□□□ 0.07
Csmd3Q80T79 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Csmd3Q80T79 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Csmd3Q80T79 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Csmd3Q80T79 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Csmd3Q80T79 Gm22238-201ENSMUST00000175222 88 ntBASIC15.48■□□□□ 0.07
Csmd3Q80T79 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Csmd3Q80T79 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Csmd3Q80T79 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Csmd3Q80T79 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Csmd3Q80T79 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Csmd3Q80T79 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Csmd3Q80T79 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.48■□□□□ 0.07
Csmd3Q80T79 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Csmd3Q80T79 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Csmd3Q80T79 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Csmd3Q80T79 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Csmd3Q80T79 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Csmd3Q80T79 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Csmd3Q80T79 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.47■□□□□ 0.07
Csmd3Q80T79 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.46■□□□□ 0.07
Csmd3Q80T79 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.46■□□□□ 0.07
Csmd3Q80T79 Gm9847-201ENSMUST00000052528 599 ntBASIC15.46■□□□□ 0.07
Csmd3Q80T79 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Csmd3Q80T79 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.46■□□□□ 0.07
Csmd3Q80T79 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Csmd3Q80T79 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms