Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAI1Q7Z5J4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.04■□□□□ 0.96
RAI1Q7Z5J4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI1Q7Z5J4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI1Q7Z5J4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.04■□□□□ 0.96
RAI1Q7Z5J4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAI1Q7Z5J4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAI1Q7Z5J4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI1Q7Z5J4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI1Q7Z5J4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI1Q7Z5J4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAI1Q7Z5J4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RAI1Q7Z5J4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RAI1Q7Z5J4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAI1Q7Z5J4 KRT8P33-201ENST00000508125 1423 ntBASIC21.02■□□□□ 0.96
RAI1Q7Z5J4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.02■□□□□ 0.95
RAI1Q7Z5J4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RAI1Q7Z5J4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RAI1Q7Z5J4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RAI1Q7Z5J4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RAI1Q7Z5J4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.01■□□□□ 0.95
RAI1Q7Z5J4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAI1Q7Z5J4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.01■□□□□ 0.95
RAI1Q7Z5J4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAI1Q7Z5J4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RAI1Q7Z5J4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAI1Q7Z5J4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAI1Q7Z5J4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAI1Q7Z5J4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21■□□□□ 0.95
RAI1Q7Z5J4 AC103834.1-201ENST00000520383 144 ntBASIC21■□□□□ 0.95
RAI1Q7Z5J4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21■□□□□ 0.95
RAI1Q7Z5J4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAI1Q7Z5J4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAI1Q7Z5J4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAI1Q7Z5J4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.99■□□□□ 0.95
RAI1Q7Z5J4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAI1Q7Z5J4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.98■□□□□ 0.95
RAI1Q7Z5J4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAI1Q7Z5J4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RAI1Q7Z5J4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAI1Q7Z5J4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.98■□□□□ 0.95
RAI1Q7Z5J4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAI1Q7Z5J4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.98■□□□□ 0.95
RAI1Q7Z5J4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAI1Q7Z5J4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.97■□□□□ 0.95
RAI1Q7Z5J4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAI1Q7Z5J4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAI1Q7Z5J4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.97■□□□□ 0.95
RAI1Q7Z5J4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAI1Q7Z5J4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.96■□□□□ 0.95
RAI1Q7Z5J4 BX255925.1-201ENST00000566954 1854 ntBASIC20.96■□□□□ 0.95
RAI1Q7Z5J4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAI1Q7Z5J4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAI1Q7Z5J4 GUSBP5-201ENST00000418136 578 ntBASIC20.96■□□□□ 0.95
RAI1Q7Z5J4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAI1Q7Z5J4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAI1Q7Z5J4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAI1Q7Z5J4 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.95■□□□□ 0.94
RAI1Q7Z5J4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.95■□□□□ 0.94
RAI1Q7Z5J4 BHLHE23-202ENST00000612929 1109 ntBASIC20.95■□□□□ 0.94
RAI1Q7Z5J4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RAI1Q7Z5J4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RAI1Q7Z5J4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAI1Q7Z5J4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.94■□□□□ 0.94
RAI1Q7Z5J4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAI1Q7Z5J4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RAI1Q7Z5J4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.93■□□□□ 0.94
RAI1Q7Z5J4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAI1Q7Z5J4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.93■□□□□ 0.94
RAI1Q7Z5J4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAI1Q7Z5J4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAI1Q7Z5J4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAI1Q7Z5J4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RAI1Q7Z5J4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAI1Q7Z5J4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAI1Q7Z5J4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.9■□□□□ 0.94
RAI1Q7Z5J4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI1Q7Z5J4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAI1Q7Z5J4 AL592295.1-201ENST00000400984 884 ntBASIC20.9■□□□□ 0.94
RAI1Q7Z5J4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAI1Q7Z5J4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms