Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 GUK1-205ENST00000366722 850 ntTSL 3 BASIC32.66■■■□□ 2.82
BRWD3Q6RI45 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
BRWD3Q6RI45 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC32.65■■■□□ 2.82
BRWD3Q6RI45 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
BRWD3Q6RI45 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
BRWD3Q6RI45 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
BRWD3Q6RI45 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
BRWD3Q6RI45 AC026271.2-201ENST00000428091 497 ntBASIC32.65■■■□□ 2.82
BRWD3Q6RI45 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
BRWD3Q6RI45 ZNRF2P3-201ENST00000424200 374 ntBASIC32.63■■■□□ 2.81
BRWD3Q6RI45 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.63■■■□□ 2.81
BRWD3Q6RI45 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
BRWD3Q6RI45 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.62■■■□□ 2.81
BRWD3Q6RI45 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
BRWD3Q6RI45 AC100797.4-201ENST00000631653 1827 ntBASIC32.61■■■□□ 2.81
BRWD3Q6RI45 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.61■■■□□ 2.81
BRWD3Q6RI45 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
BRWD3Q6RI45 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC32.6■■■□□ 2.81
BRWD3Q6RI45 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
BRWD3Q6RI45 AC104564.3-201ENST00000582367 638 ntBASIC32.59■■■□□ 2.81
BRWD3Q6RI45 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
BRWD3Q6RI45 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC32.58■■■□□ 2.81
BRWD3Q6RI45 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
BRWD3Q6RI45 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC32.58■■■□□ 2.81
BRWD3Q6RI45 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
BRWD3Q6RI45 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
BRWD3Q6RI45 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
BRWD3Q6RI45 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
BRWD3Q6RI45 RPP21-222ENST00000433076 577 ntTSL 2 BASIC32.56■■■□□ 2.8
BRWD3Q6RI45 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC32.56■■■□□ 2.8
BRWD3Q6RI45 AC096631.2-201ENST00000436136 790 ntBASIC32.56■■■□□ 2.8
BRWD3Q6RI45 TSPY9P-201ENST00000440215 945 ntBASIC32.54■■■□□ 2.8
BRWD3Q6RI45 TSPY11P-201ENST00000442607 1045 ntBASIC32.54■■■□□ 2.8
BRWD3Q6RI45 AL117332.1-201ENST00000622628 974 ntBASIC32.54■■■□□ 2.8
BRWD3Q6RI45 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
BRWD3Q6RI45 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC32.54■■■□□ 2.8
BRWD3Q6RI45 RPS2P7-201ENST00000447334 885 ntBASIC32.54■■■□□ 2.8
BRWD3Q6RI45 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
BRWD3Q6RI45 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
BRWD3Q6RI45 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC32.53■■■□□ 2.8
BRWD3Q6RI45 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC32.53■■■□□ 2.8
BRWD3Q6RI45 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.53■■■□□ 2.8
BRWD3Q6RI45 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.53■■■□□ 2.8
BRWD3Q6RI45 AL359504.2-201ENST00000605506 1601 ntBASIC32.53■■■□□ 2.8
BRWD3Q6RI45 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
BRWD3Q6RI45 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
BRWD3Q6RI45 AC005837.3-201ENST00000612163 286 ntBASIC32.52■■■□□ 2.8
BRWD3Q6RI45 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
BRWD3Q6RI45 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
BRWD3Q6RI45 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
BRWD3Q6RI45 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
BRWD3Q6RI45 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
BRWD3Q6RI45 MIR4466-201ENST00000606121 54 ntBASIC32.51■■■□□ 2.8
BRWD3Q6RI45 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
BRWD3Q6RI45 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
BRWD3Q6RI45 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.5■■■□□ 2.79
BRWD3Q6RI45 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.5■■■□□ 2.79
BRWD3Q6RI45 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
BRWD3Q6RI45 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
BRWD3Q6RI45 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC32.49■■■□□ 2.79
BRWD3Q6RI45 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.49■■■□□ 2.79
BRWD3Q6RI45 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BRWD3Q6RI45 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BRWD3Q6RI45 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.49■■■□□ 2.79
BRWD3Q6RI45 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.49■■■□□ 2.79
BRWD3Q6RI45 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BRWD3Q6RI45 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
BRWD3Q6RI45 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.48■■■□□ 2.79
BRWD3Q6RI45 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
BRWD3Q6RI45 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
BRWD3Q6RI45 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
BRWD3Q6RI45 AC137630.3-201ENST00000607245 391 ntBASIC32.47■■■□□ 2.79
BRWD3Q6RI45 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
BRWD3Q6RI45 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
BRWD3Q6RI45 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
BRWD3Q6RI45 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
BRWD3Q6RI45 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC32.47■■■□□ 2.79
BRWD3Q6RI45 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.46■■■□□ 2.79
BRWD3Q6RI45 AC021242.3-201ENST00000607598 1377 ntBASIC32.46■■■□□ 2.79
BRWD3Q6RI45 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
BRWD3Q6RI45 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC32.45■■■□□ 2.79
BRWD3Q6RI45 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.45■■■□□ 2.79
BRWD3Q6RI45 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
BRWD3Q6RI45 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.44■■■□□ 2.78
BRWD3Q6RI45 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
BRWD3Q6RI45 AC022616.5-201ENST00000518796 181 ntBASIC32.44■■■□□ 2.78
BRWD3Q6RI45 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
BRWD3Q6RI45 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
BRWD3Q6RI45 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
BRWD3Q6RI45 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
BRWD3Q6RI45 QDPR-206ENST00000508623 601 ntTSL 3 BASIC32.43■■■□□ 2.78
BRWD3Q6RI45 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.42■■■□□ 2.78
BRWD3Q6RI45 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC32.42■■■□□ 2.78
BRWD3Q6RI45 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.42■■■□□ 2.78
BRWD3Q6RI45 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
BRWD3Q6RI45 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
BRWD3Q6RI45 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC32.42■■■□□ 2.78
BRWD3Q6RI45 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
BRWD3Q6RI45 AL512631.2-201ENST00000604634 923 ntBASIC32.4■■■□□ 2.78
BRWD3Q6RI45 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms