Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Scarb1Q61009 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Scarb1Q61009 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scarb1Q61009 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scarb1Q61009 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scarb1Q61009 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.58■□□□□ 0.57
Scarb1Q61009 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Scarb1Q61009 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scarb1Q61009 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scarb1Q61009 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scarb1Q61009 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scarb1Q61009 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.57■□□□□ 0.56
Scarb1Q61009 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scarb1Q61009 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scarb1Q61009 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scarb1Q61009 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scarb1Q61009 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Scarb1Q61009 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scarb1Q61009 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scarb1Q61009 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scarb1Q61009 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scarb1Q61009 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scarb1Q61009 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scarb1Q61009 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scarb1Q61009 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scarb1Q61009 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.52■□□□□ 0.56
Scarb1Q61009 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.52■□□□□ 0.56
Scarb1Q61009 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Scarb1Q61009 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scarb1Q61009 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Scarb1Q61009 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scarb1Q61009 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scarb1Q61009 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Scarb1Q61009 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.51■□□□□ 0.55
Scarb1Q61009 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scarb1Q61009 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.5■□□□□ 0.55
Scarb1Q61009 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.5■□□□□ 0.55
Scarb1Q61009 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Scarb1Q61009 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scarb1Q61009 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.5■□□□□ 0.55
Scarb1Q61009 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scarb1Q61009 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scarb1Q61009 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scarb1Q61009 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scarb1Q61009 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Scarb1Q61009 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scarb1Q61009 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.49■□□□□ 0.55
Scarb1Q61009 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.48■□□□□ 0.55
Scarb1Q61009 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Scarb1Q61009 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scarb1Q61009 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scarb1Q61009 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Scarb1Q61009 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scarb1Q61009 Gm37136-201ENSMUST00000194368 194 ntBASIC18.47■□□□□ 0.55
Scarb1Q61009 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scarb1Q61009 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scarb1Q61009 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scarb1Q61009 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scarb1Q61009 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Scarb1Q61009 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Scarb1Q61009 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.45■□□□□ 0.54
Scarb1Q61009 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Scarb1Q61009 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Scarb1Q61009 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.45■□□□□ 0.54
Scarb1Q61009 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Scarb1Q61009 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scarb1Q61009 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Scarb1Q61009 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.44■□□□□ 0.54
Scarb1Q61009 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scarb1Q61009 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scarb1Q61009 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scarb1Q61009 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scarb1Q61009 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scarb1Q61009 Nkain2-201ENSMUST00000092602 558 ntBASIC18.43■□□□□ 0.54
Scarb1Q61009 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scarb1Q61009 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scarb1Q61009 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.42■□□□□ 0.54
Scarb1Q61009 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scarb1Q61009 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scarb1Q61009 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scarb1Q61009 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scarb1Q61009 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scarb1Q61009 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scarb1Q61009 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scarb1Q61009 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Scarb1Q61009 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scarb1Q61009 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scarb1Q61009 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scarb1Q61009 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scarb1Q61009 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms