Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trp53rkaQ5U452 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trp53rkaQ5U452 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trp53rkaQ5U452 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trp53rkaQ5U452 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trp53rkaQ5U452 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trp53rkaQ5U452 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trp53rkaQ5U452 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trp53rkaQ5U452 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Trp53rkaQ5U452 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trp53rkaQ5U452 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trp53rkaQ5U452 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trp53rkaQ5U452 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trp53rkaQ5U452 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trp53rkaQ5U452 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trp53rkaQ5U452 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trp53rkaQ5U452 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trp53rkaQ5U452 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trp53rkaQ5U452 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.35■□□□□ 0.37
Trp53rkaQ5U452 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trp53rkaQ5U452 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trp53rkaQ5U452 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trp53rkaQ5U452 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trp53rkaQ5U452 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trp53rkaQ5U452 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trp53rkaQ5U452 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trp53rkaQ5U452 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trp53rkaQ5U452 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trp53rkaQ5U452 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.33■□□□□ 0.36
Trp53rkaQ5U452 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trp53rkaQ5U452 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trp53rkaQ5U452 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trp53rkaQ5U452 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trp53rkaQ5U452 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trp53rkaQ5U452 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trp53rkaQ5U452 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trp53rkaQ5U452 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trp53rkaQ5U452 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trp53rkaQ5U452 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trp53rkaQ5U452 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.3■□□□□ 0.36
Trp53rkaQ5U452 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trp53rkaQ5U452 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trp53rkaQ5U452 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.3■□□□□ 0.36
Trp53rkaQ5U452 Zfp131-205ENSMUST00000223812 663 ntBASIC17.3■□□□□ 0.36
Trp53rkaQ5U452 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trp53rkaQ5U452 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trp53rkaQ5U452 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trp53rkaQ5U452 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trp53rkaQ5U452 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trp53rkaQ5U452 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trp53rkaQ5U452 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trp53rkaQ5U452 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trp53rkaQ5U452 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trp53rkaQ5U452 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trp53rkaQ5U452 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trp53rkaQ5U452 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trp53rkaQ5U452 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trp53rkaQ5U452 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trp53rkaQ5U452 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trp53rkaQ5U452 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trp53rkaQ5U452 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trp53rkaQ5U452 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trp53rkaQ5U452 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trp53rkaQ5U452 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trp53rkaQ5U452 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trp53rkaQ5U452 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.26■□□□□ 0.35
Trp53rkaQ5U452 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trp53rkaQ5U452 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trp53rkaQ5U452 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trp53rkaQ5U452 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trp53rkaQ5U452 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trp53rkaQ5U452 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trp53rkaQ5U452 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trp53rkaQ5U452 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trp53rkaQ5U452 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trp53rkaQ5U452 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.24■□□□□ 0.35
Trp53rkaQ5U452 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.24■□□□□ 0.35
Trp53rkaQ5U452 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.24■□□□□ 0.35
Trp53rkaQ5U452 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trp53rkaQ5U452 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trp53rkaQ5U452 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trp53rkaQ5U452 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trp53rkaQ5U452 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trp53rkaQ5U452 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trp53rkaQ5U452 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trp53rkaQ5U452 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trp53rkaQ5U452 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.23■□□□□ 0.35
Trp53rkaQ5U452 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trp53rkaQ5U452 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.23■□□□□ 0.35
Trp53rkaQ5U452 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.23■□□□□ 0.35
Trp53rkaQ5U452 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms