Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clhc1Q5M6W3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.26■□□□□ 0.99
Clhc1Q5M6W3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Clhc1Q5M6W3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clhc1Q5M6W3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clhc1Q5M6W3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clhc1Q5M6W3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.25■□□□□ 0.99
Clhc1Q5M6W3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Clhc1Q5M6W3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clhc1Q5M6W3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clhc1Q5M6W3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clhc1Q5M6W3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clhc1Q5M6W3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clhc1Q5M6W3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clhc1Q5M6W3 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.23■□□□□ 0.99
Clhc1Q5M6W3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clhc1Q5M6W3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clhc1Q5M6W3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clhc1Q5M6W3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clhc1Q5M6W3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clhc1Q5M6W3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Clhc1Q5M6W3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clhc1Q5M6W3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clhc1Q5M6W3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Clhc1Q5M6W3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clhc1Q5M6W3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clhc1Q5M6W3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clhc1Q5M6W3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clhc1Q5M6W3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clhc1Q5M6W3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Clhc1Q5M6W3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clhc1Q5M6W3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Clhc1Q5M6W3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clhc1Q5M6W3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clhc1Q5M6W3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clhc1Q5M6W3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clhc1Q5M6W3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.2■□□□□ 0.98
Clhc1Q5M6W3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clhc1Q5M6W3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.19■□□□□ 0.98
Clhc1Q5M6W3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clhc1Q5M6W3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clhc1Q5M6W3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Clhc1Q5M6W3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Clhc1Q5M6W3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clhc1Q5M6W3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clhc1Q5M6W3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clhc1Q5M6W3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clhc1Q5M6W3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clhc1Q5M6W3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clhc1Q5M6W3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Clhc1Q5M6W3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clhc1Q5M6W3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clhc1Q5M6W3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Clhc1Q5M6W3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Clhc1Q5M6W3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clhc1Q5M6W3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Clhc1Q5M6W3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clhc1Q5M6W3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clhc1Q5M6W3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clhc1Q5M6W3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Clhc1Q5M6W3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clhc1Q5M6W3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.14■□□□□ 0.97
Clhc1Q5M6W3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clhc1Q5M6W3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clhc1Q5M6W3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clhc1Q5M6W3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.14■□□□□ 0.97
Clhc1Q5M6W3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clhc1Q5M6W3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Clhc1Q5M6W3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clhc1Q5M6W3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clhc1Q5M6W3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clhc1Q5M6W3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clhc1Q5M6W3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clhc1Q5M6W3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clhc1Q5M6W3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clhc1Q5M6W3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clhc1Q5M6W3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Clhc1Q5M6W3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.11■□□□□ 0.97
Clhc1Q5M6W3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Clhc1Q5M6W3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clhc1Q5M6W3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clhc1Q5M6W3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Clhc1Q5M6W3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Clhc1Q5M6W3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clhc1Q5M6W3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clhc1Q5M6W3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Clhc1Q5M6W3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clhc1Q5M6W3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clhc1Q5M6W3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clhc1Q5M6W3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.09■□□□□ 0.97
Clhc1Q5M6W3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clhc1Q5M6W3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clhc1Q5M6W3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clhc1Q5M6W3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clhc1Q5M6W3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Clhc1Q5M6W3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clhc1Q5M6W3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clhc1Q5M6W3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.07■□□□□ 0.96
Clhc1Q5M6W3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clhc1Q5M6W3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms