Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.78■■□□□ 1.4
CCSMST1Q4G0I0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCSMST1Q4G0I0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCSMST1Q4G0I0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCSMST1Q4G0I0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.78■■□□□ 1.4
CCSMST1Q4G0I0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCSMST1Q4G0I0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCSMST1Q4G0I0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCSMST1Q4G0I0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCSMST1Q4G0I0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.77■■□□□ 1.4
CCSMST1Q4G0I0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSMST1Q4G0I0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.76■■□□□ 1.39
CCSMST1Q4G0I0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
CCSMST1Q4G0I0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSMST1Q4G0I0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCSMST1Q4G0I0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCSMST1Q4G0I0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCSMST1Q4G0I0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.75■■□□□ 1.39
CCSMST1Q4G0I0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.75■■□□□ 1.39
CCSMST1Q4G0I0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.75■■□□□ 1.39
CCSMST1Q4G0I0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCSMST1Q4G0I0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.74■■□□□ 1.39
CCSMST1Q4G0I0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.74■■□□□ 1.39
CCSMST1Q4G0I0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCSMST1Q4G0I0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCSMST1Q4G0I0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCSMST1Q4G0I0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCSMST1Q4G0I0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCSMST1Q4G0I0 RARRES2P2-201ENST00000394842 485 ntBASIC23.73■■□□□ 1.39
CCSMST1Q4G0I0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.73■■□□□ 1.39
CCSMST1Q4G0I0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCSMST1Q4G0I0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.73■■□□□ 1.39
CCSMST1Q4G0I0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCSMST1Q4G0I0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.73■■□□□ 1.39
CCSMST1Q4G0I0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCSMST1Q4G0I0 AC007029.1-201ENST00000604183 313 ntBASIC23.72■■□□□ 1.39
CCSMST1Q4G0I0 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.72■■□□□ 1.39
CCSMST1Q4G0I0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCSMST1Q4G0I0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCSMST1Q4G0I0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CCSMST1Q4G0I0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCSMST1Q4G0I0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CCSMST1Q4G0I0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CCSMST1Q4G0I0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCSMST1Q4G0I0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCSMST1Q4G0I0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CCSMST1Q4G0I0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCSMST1Q4G0I0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCSMST1Q4G0I0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.7■■□□□ 1.38
CCSMST1Q4G0I0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCSMST1Q4G0I0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCSMST1Q4G0I0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.69■■□□□ 1.38
CCSMST1Q4G0I0 AC091060.1-201ENST00000623524 1766 ntBASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 MIR3960-201ENST00000583311 91 ntBASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCSMST1Q4G0I0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CCSMST1Q4G0I0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CCSMST1Q4G0I0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCSMST1Q4G0I0 RP9P-202ENST00000450133 1212 ntBASIC23.67■■□□□ 1.38
CCSMST1Q4G0I0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCSMST1Q4G0I0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CCSMST1Q4G0I0 AC093536.1-201ENST00000569153 554 ntBASIC23.66■■□□□ 1.38
CCSMST1Q4G0I0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCSMST1Q4G0I0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCSMST1Q4G0I0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCSMST1Q4G0I0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCSMST1Q4G0I0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCSMST1Q4G0I0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCSMST1Q4G0I0 AC092803.2-201ENST00000564287 1899 ntBASIC23.64■■□□□ 1.38
CCSMST1Q4G0I0 ERN1-208ENST00000606895 2068 ntBASIC23.64■■□□□ 1.37
CCSMST1Q4G0I0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.64■■□□□ 1.37
CCSMST1Q4G0I0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.63■■□□□ 1.37
CCSMST1Q4G0I0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.62■■□□□ 1.37
CCSMST1Q4G0I0 AC026202.3-201ENST00000600805 1127 ntBASIC23.62■■□□□ 1.37
CCSMST1Q4G0I0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
CCSMST1Q4G0I0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.62■■□□□ 1.37
CCSMST1Q4G0I0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.61■■□□□ 1.37
CCSMST1Q4G0I0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.61■■□□□ 1.37
CCSMST1Q4G0I0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCSMST1Q4G0I0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCSMST1Q4G0I0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCSMST1Q4G0I0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.61■■□□□ 1.37
CCSMST1Q4G0I0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CCSMST1Q4G0I0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
CCSMST1Q4G0I0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCSMST1Q4G0I0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms