Protein–RNA interactions for Protein: Q3V0S8

1700012B07Rik, MCG19638, isoform CRA_b, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700012B07RikQ3V0S8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
1700012B07RikQ3V0S8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.74■□□□□ 0.91
1700012B07RikQ3V0S8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
1700012B07RikQ3V0S8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
1700012B07RikQ3V0S8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.73■□□□□ 0.91
1700012B07RikQ3V0S8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
1700012B07RikQ3V0S8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
1700012B07RikQ3V0S8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
1700012B07RikQ3V0S8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
1700012B07RikQ3V0S8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
1700012B07RikQ3V0S8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
1700012B07RikQ3V0S8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
1700012B07RikQ3V0S8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
1700012B07RikQ3V0S8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
1700012B07RikQ3V0S8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
1700012B07RikQ3V0S8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
1700012B07RikQ3V0S8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
1700012B07RikQ3V0S8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
1700012B07RikQ3V0S8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
1700012B07RikQ3V0S8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
1700012B07RikQ3V0S8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
1700012B07RikQ3V0S8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
1700012B07RikQ3V0S8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
1700012B07RikQ3V0S8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
1700012B07RikQ3V0S8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
1700012B07RikQ3V0S8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
1700012B07RikQ3V0S8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
1700012B07RikQ3V0S8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700012B07RikQ3V0S8 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.69■□□□□ 0.9
1700012B07RikQ3V0S8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700012B07RikQ3V0S8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700012B07RikQ3V0S8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700012B07RikQ3V0S8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700012B07RikQ3V0S8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
1700012B07RikQ3V0S8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
1700012B07RikQ3V0S8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
1700012B07RikQ3V0S8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700012B07RikQ3V0S8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
1700012B07RikQ3V0S8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
1700012B07RikQ3V0S8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700012B07RikQ3V0S8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
1700012B07RikQ3V0S8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
1700012B07RikQ3V0S8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
1700012B07RikQ3V0S8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
1700012B07RikQ3V0S8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.67■□□□□ 0.9
1700012B07RikQ3V0S8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
1700012B07RikQ3V0S8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
1700012B07RikQ3V0S8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.66■□□□□ 0.9
1700012B07RikQ3V0S8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
1700012B07RikQ3V0S8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
1700012B07RikQ3V0S8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
1700012B07RikQ3V0S8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
1700012B07RikQ3V0S8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
1700012B07RikQ3V0S8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.65■□□□□ 0.9
1700012B07RikQ3V0S8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
1700012B07RikQ3V0S8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
1700012B07RikQ3V0S8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
1700012B07RikQ3V0S8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
1700012B07RikQ3V0S8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
1700012B07RikQ3V0S8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
1700012B07RikQ3V0S8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
1700012B07RikQ3V0S8 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.63■□□□□ 0.89
1700012B07RikQ3V0S8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.63■□□□□ 0.89
1700012B07RikQ3V0S8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
1700012B07RikQ3V0S8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.62■□□□□ 0.89
1700012B07RikQ3V0S8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
1700012B07RikQ3V0S8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
1700012B07RikQ3V0S8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
1700012B07RikQ3V0S8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.61■□□□□ 0.89
1700012B07RikQ3V0S8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.6■□□□□ 0.89
1700012B07RikQ3V0S8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
1700012B07RikQ3V0S8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
1700012B07RikQ3V0S8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
1700012B07RikQ3V0S8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.6■□□□□ 0.89
1700012B07RikQ3V0S8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
1700012B07RikQ3V0S8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
1700012B07RikQ3V0S8 Gm10420-201ENSMUST00000121713 882 ntBASIC20.59■□□□□ 0.89
1700012B07RikQ3V0S8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
1700012B07RikQ3V0S8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
1700012B07RikQ3V0S8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
1700012B07RikQ3V0S8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
1700012B07RikQ3V0S8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
1700012B07RikQ3V0S8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
1700012B07RikQ3V0S8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
1700012B07RikQ3V0S8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
1700012B07RikQ3V0S8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
1700012B07RikQ3V0S8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
1700012B07RikQ3V0S8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
1700012B07RikQ3V0S8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
1700012B07RikQ3V0S8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
1700012B07RikQ3V0S8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms