Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.73■■□□□ 1.23
Fam196aQ3USH1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Fam196aQ3USH1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Fam196aQ3USH1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.72■■□□□ 1.23
Fam196aQ3USH1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Fam196aQ3USH1 Gm22238-201ENSMUST00000175222 88 ntBASIC22.71■■□□□ 1.23
Fam196aQ3USH1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Fam196aQ3USH1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Fam196aQ3USH1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Fam196aQ3USH1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam196aQ3USH1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Fam196aQ3USH1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam196aQ3USH1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fam196aQ3USH1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fam196aQ3USH1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fam196aQ3USH1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fam196aQ3USH1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.69■■□□□ 1.22
Fam196aQ3USH1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fam196aQ3USH1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Fam196aQ3USH1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Fam196aQ3USH1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Fam196aQ3USH1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Fam196aQ3USH1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Fam196aQ3USH1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.67■■□□□ 1.22
Fam196aQ3USH1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Fam196aQ3USH1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Fam196aQ3USH1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Fam196aQ3USH1 Gm12821-201ENSMUST00000120022 600 ntBASIC22.66■■□□□ 1.22
Fam196aQ3USH1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Fam196aQ3USH1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Fam196aQ3USH1 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.65■■□□□ 1.22
Fam196aQ3USH1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Fam196aQ3USH1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.65■■□□□ 1.22
Fam196aQ3USH1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Fam196aQ3USH1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Fam196aQ3USH1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Fam196aQ3USH1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.63■■□□□ 1.21
Fam196aQ3USH1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
Fam196aQ3USH1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam196aQ3USH1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.61■■□□□ 1.21
Fam196aQ3USH1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam196aQ3USH1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam196aQ3USH1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam196aQ3USH1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fam196aQ3USH1 Gm12922-201ENSMUST00000120626 809 ntBASIC22.6■■□□□ 1.21
Fam196aQ3USH1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.6■■□□□ 1.21
Fam196aQ3USH1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.6■■□□□ 1.21
Fam196aQ3USH1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fam196aQ3USH1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fam196aQ3USH1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Fam196aQ3USH1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Fam196aQ3USH1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Fam196aQ3USH1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.58■■□□□ 1.21
Fam196aQ3USH1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Fam196aQ3USH1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.57■■□□□ 1.2
Fam196aQ3USH1 Gm27454-201ENSMUST00000185090 204 ntBASIC22.57■■□□□ 1.2
Fam196aQ3USH1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Fam196aQ3USH1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Fam196aQ3USH1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Fam196aQ3USH1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Fam196aQ3USH1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Fam196aQ3USH1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.55■■□□□ 1.2
Fam196aQ3USH1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.55■■□□□ 1.2
Fam196aQ3USH1 Gm40881-201ENSMUST00000223397 166 ntBASIC22.55■■□□□ 1.2
Fam196aQ3USH1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Fam196aQ3USH1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Fam196aQ3USH1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.55■■□□□ 1.2
Fam196aQ3USH1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Fam196aQ3USH1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Fam196aQ3USH1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Fam196aQ3USH1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Fam196aQ3USH1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Fam196aQ3USH1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Fam196aQ3USH1 Gm45417-201ENSMUST00000209533 758 ntBASIC22.54■■□□□ 1.2
Fam196aQ3USH1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Fam196aQ3USH1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Fam196aQ3USH1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Fam196aQ3USH1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Fam196aQ3USH1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.52■■□□□ 1.2
Fam196aQ3USH1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Fam196aQ3USH1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Fam196aQ3USH1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Fam196aQ3USH1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Fam196aQ3USH1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Fam196aQ3USH1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Fam196aQ3USH1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.51■■□□□ 1.19
Fam196aQ3USH1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.51■■□□□ 1.19
Fam196aQ3USH1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Fam196aQ3USH1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Fam196aQ3USH1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Fam196aQ3USH1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Fam196aQ3USH1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms