Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Tnrc6aQ3UHK8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tnrc6aQ3UHK8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnrc6aQ3UHK8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tnrc6aQ3UHK8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tnrc6aQ3UHK8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Tnrc6aQ3UHK8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnrc6aQ3UHK8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnrc6aQ3UHK8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnrc6aQ3UHK8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnrc6aQ3UHK8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.81■□□□□ 0.92
Tnrc6aQ3UHK8 Rps24-207ENSMUST00000224568 714 ntBASIC20.81■□□□□ 0.92
Tnrc6aQ3UHK8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnrc6aQ3UHK8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnrc6aQ3UHK8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Tnrc6aQ3UHK8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnrc6aQ3UHK8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnrc6aQ3UHK8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnrc6aQ3UHK8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnrc6aQ3UHK8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnrc6aQ3UHK8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnrc6aQ3UHK8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnrc6aQ3UHK8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnrc6aQ3UHK8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.79■□□□□ 0.92
Tnrc6aQ3UHK8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tnrc6aQ3UHK8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnrc6aQ3UHK8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnrc6aQ3UHK8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnrc6aQ3UHK8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
Tnrc6aQ3UHK8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.77■□□□□ 0.92
Tnrc6aQ3UHK8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnrc6aQ3UHK8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnrc6aQ3UHK8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnrc6aQ3UHK8 Gm45102-201ENSMUST00000207427 857 ntBASIC20.76■□□□□ 0.91
Tnrc6aQ3UHK8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnrc6aQ3UHK8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnrc6aQ3UHK8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tnrc6aQ3UHK8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnrc6aQ3UHK8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnrc6aQ3UHK8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tnrc6aQ3UHK8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnrc6aQ3UHK8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tnrc6aQ3UHK8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnrc6aQ3UHK8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnrc6aQ3UHK8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnrc6aQ3UHK8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnrc6aQ3UHK8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnrc6aQ3UHK8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc6aQ3UHK8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc6aQ3UHK8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc6aQ3UHK8 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.72■□□□□ 0.91
Tnrc6aQ3UHK8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc6aQ3UHK8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.72■□□□□ 0.91
Tnrc6aQ3UHK8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc6aQ3UHK8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tnrc6aQ3UHK8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.71■□□□□ 0.91
Tnrc6aQ3UHK8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnrc6aQ3UHK8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnrc6aQ3UHK8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnrc6aQ3UHK8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc6aQ3UHK8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc6aQ3UHK8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc6aQ3UHK8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tnrc6aQ3UHK8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms