Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cln6Q3U466 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cln6Q3U466 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cln6Q3U466 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cln6Q3U466 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Cln6Q3U466 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cln6Q3U466 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cln6Q3U466 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cln6Q3U466 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cln6Q3U466 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cln6Q3U466 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cln6Q3U466 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.69■□□□□ 0.58
Cln6Q3U466 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.69■□□□□ 0.58
Cln6Q3U466 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Cln6Q3U466 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cln6Q3U466 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cln6Q3U466 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.68■□□□□ 0.58
Cln6Q3U466 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cln6Q3U466 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Cln6Q3U466 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cln6Q3U466 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cln6Q3U466 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cln6Q3U466 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cln6Q3U466 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.66■□□□□ 0.58
Cln6Q3U466 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cln6Q3U466 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cln6Q3U466 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cln6Q3U466 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln6Q3U466 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cln6Q3U466 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cln6Q3U466 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln6Q3U466 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln6Q3U466 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln6Q3U466 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cln6Q3U466 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Cln6Q3U466 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cln6Q3U466 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cln6Q3U466 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cln6Q3U466 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.62■□□□□ 0.57
Cln6Q3U466 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cln6Q3U466 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.61■□□□□ 0.57
Cln6Q3U466 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cln6Q3U466 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.61■□□□□ 0.57
Cln6Q3U466 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln6Q3U466 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.6■□□□□ 0.57
Cln6Q3U466 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln6Q3U466 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln6Q3U466 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln6Q3U466 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cln6Q3U466 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Cln6Q3U466 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln6Q3U466 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln6Q3U466 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln6Q3U466 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Cln6Q3U466 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln6Q3U466 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms