Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RBM3P98179 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBM3P98179 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBM3P98179 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RBM3P98179 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBM3P98179 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBM3P98179 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBM3P98179 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBM3P98179 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RBM3P98179 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBM3P98179 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBM3P98179 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBM3P98179 AC142381.3-201ENST00000568208 1670 ntBASIC15.31■□□□□ 0.04
RBM3P98179 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBM3P98179 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBM3P98179 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC15.31■□□□□ 0.04
RBM3P98179 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC15.31■□□□□ 0.04
RBM3P98179 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBM3P98179 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBM3P98179 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBM3P98179 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RBM3P98179 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 LINC00543-201ENST00000567234 1845 ntBASIC15.3■□□□□ 0.04
RBM3P98179 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.3■□□□□ 0.04
RBM3P98179 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RBM3P98179 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBM3P98179 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RBM3P98179 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RBM3P98179 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RBM3P98179 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM3P98179 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RBM3P98179 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM3P98179 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RBM3P98179 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM3P98179 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM3P98179 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM3P98179 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM3P98179 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RBM3P98179 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM3P98179 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM3P98179 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RBM3P98179 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RBM3P98179 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM3P98179 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM3P98179 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM3P98179 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM3P98179 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM3P98179 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RBM3P98179 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
RBM3P98179 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RBM3P98179 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM3P98179 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RBM3P98179 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RBM3P98179 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM3P98179 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.26■□□□□ 0.03
RBM3P98179 AC018358.1-201ENST00000631079 1402 ntBASIC15.26■□□□□ 0.03
RBM3P98179 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.26■□□□□ 0.03
RBM3P98179 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBM3P98179 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBM3P98179 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBM3P98179 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBM3P98179 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBM3P98179 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RBM3P98179 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RBM3P98179 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBM3P98179 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.26■□□□□ 0.03
RBM3P98179 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBM3P98179 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RBM3P98179 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RBM3P98179 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RBM3P98179 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.25■□□□□ 0.03
RBM3P98179 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBM3P98179 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBM3P98179 AC127502.1-201ENST00000399971 1502 ntBASIC15.25■□□□□ 0.03
RBM3P98179 AC079834.2-201ENST00000609776 1949 ntBASIC15.25■□□□□ 0.03
RBM3P98179 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBM3P98179 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBM3P98179 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBM3P98179 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBM3P98179 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RBM3P98179 PREB-202ENST00000406567 1910 ntTSL 5 BASIC15.24■□□□□ 0.03
RBM3P98179 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC15.24■□□□□ 0.03
RBM3P98179 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC15.24■□□□□ 0.03
RBM3P98179 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RBM3P98179 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.24■□□□□ 0.03
RBM3P98179 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RBM3P98179 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBM3P98179 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBM3P98179 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBM3P98179 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBM3P98179 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBM3P98179 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC15.23■□□□□ 0.03
RBM3P98179 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms