Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NKX6-1P78426 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.31■■□□□ 1
NKX6-1P78426 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NKX6-1P78426 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NKX6-1P78426 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.31■■□□□ 1
NKX6-1P78426 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NKX6-1P78426 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.31■■□□□ 1
NKX6-1P78426 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NKX6-1P78426 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NKX6-1P78426 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NKX6-1P78426 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NKX6-1P78426 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NKX6-1P78426 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NKX6-1P78426 BHLHE23-202ENST00000612929 1109 ntBASIC21.29■■□□□ 1
NKX6-1P78426 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NKX6-1P78426 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NKX6-1P78426 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NKX6-1P78426 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NKX6-1P78426 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NKX6-1P78426 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NKX6-1P78426 SMPD5-203ENST00000639008 1464 ntBASIC21.27■■□□□ 1
NKX6-1P78426 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.27■■□□□ 1
NKX6-1P78426 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NKX6-1P78426 AC025884.2-201ENST00000553429 711 ntBASIC21.27■■□□□ 1
NKX6-1P78426 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NKX6-1P78426 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.27■□□□□ 0.99
NKX6-1P78426 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-1P78426 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
NKX6-1P78426 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-1P78426 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
NKX6-1P78426 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.26■□□□□ 0.99
NKX6-1P78426 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-1P78426 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-1P78426 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX6-1P78426 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.25■□□□□ 0.99
NKX6-1P78426 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NKX6-1P78426 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX6-1P78426 AL592295.1-201ENST00000400984 884 ntBASIC21.25■□□□□ 0.99
NKX6-1P78426 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX6-1P78426 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
NKX6-1P78426 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.25■□□□□ 0.99
NKX6-1P78426 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.25■□□□□ 0.99
NKX6-1P78426 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
NKX6-1P78426 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.24■□□□□ 0.99
NKX6-1P78426 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.24■□□□□ 0.99
NKX6-1P78426 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.24■□□□□ 0.99
NKX6-1P78426 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NKX6-1P78426 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.24■□□□□ 0.99
NKX6-1P78426 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 AL449106.1-201ENST00000608517 1980 ntBASIC21.24■□□□□ 0.99
NKX6-1P78426 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKX6-1P78426 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.24■□□□□ 0.99
NKX6-1P78426 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NKX6-1P78426 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKX6-1P78426 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.23■□□□□ 0.99
NKX6-1P78426 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-1P78426 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-1P78426 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKX6-1P78426 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.21■□□□□ 0.99
NKX6-1P78426 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NKX6-1P78426 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKX6-1P78426 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKX6-1P78426 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.21■□□□□ 0.99
NKX6-1P78426 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.21■□□□□ 0.99
NKX6-1P78426 AC026202.3-201ENST00000600805 1127 ntBASIC21.21■□□□□ 0.99
NKX6-1P78426 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NKX6-1P78426 AL359504.2-201ENST00000605506 1601 ntBASIC21.21■□□□□ 0.99
NKX6-1P78426 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKX6-1P78426 AC074183.2-201ENST00000623112 922 ntBASIC21.2■□□□□ 0.98
NKX6-1P78426 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NKX6-1P78426 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NKX6-1P78426 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKX6-1P78426 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NKX6-1P78426 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.19■□□□□ 0.98
NKX6-1P78426 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.19■□□□□ 0.98
NKX6-1P78426 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.19■□□□□ 0.98
NKX6-1P78426 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.19■□□□□ 0.98
NKX6-1P78426 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NKX6-1P78426 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.19■□□□□ 0.98
NKX6-1P78426 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NKX6-1P78426 AC019069.1-201ENST00000610008 1333 ntBASIC21.19■□□□□ 0.98
NKX6-1P78426 KRT8P33-201ENST00000508125 1423 ntBASIC21.19■□□□□ 0.98
NKX6-1P78426 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NKX6-1P78426 DUX4L9-201ENST00000449051 1259 ntBASIC21.18■□□□□ 0.98
NKX6-1P78426 AC010980.1-201ENST00000587192 1142 ntBASIC21.18■□□□□ 0.98
NKX6-1P78426 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
NKX6-1P78426 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.17■□□□□ 0.98
NKX6-1P78426 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NKX6-1P78426 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.16■□□□□ 0.98
NKX6-1P78426 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NKX6-1P78426 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NKX6-1P78426 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NKX6-1P78426 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms