Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
HIST1H3AP68431 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H3AP68431 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIST1H3AP68431 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIST1H3AP68431 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HIST1H3AP68431 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HIST1H3AP68431 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.32■■□□□ 1
HIST1H3AP68431 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.32■■□□□ 1
HIST1H3AP68431 AC060814.1-201ENST00000554326 538 ntBASIC21.32■■□□□ 1
HIST1H3AP68431 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.32■■□□□ 1
HIST1H3AP68431 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.32■■□□□ 1
HIST1H3AP68431 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIST1H3AP68431 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.32■■□□□ 1
HIST1H3AP68431 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HIST1H3AP68431 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
HIST1H3AP68431 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HIST1H3AP68431 AL157400.5-201ENST00000507624 621 ntBASIC21.31■■□□□ 1
HIST1H3AP68431 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
HIST1H3AP68431 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H3AP68431 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.31■■□□□ 1
HIST1H3AP68431 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.3■■□□□ 1
HIST1H3AP68431 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
HIST1H3AP68431 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.3■■□□□ 1
HIST1H3AP68431 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HIST1H3AP68431 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H3AP68431 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.29■■□□□ 1
HIST1H3AP68431 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H3AP68431 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H3AP68431 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.29■■□□□ 1
HIST1H3AP68431 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.27■■□□□ 1
HIST1H3AP68431 MIR4449-201ENST00000578365 66 ntBASIC21.27■■□□□ 1
HIST1H3AP68431 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HIST1H3AP68431 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HIST1H3AP68431 AC010501.1-201ENST00000606270 1962 ntBASIC21.27■□□□□ 0.99
HIST1H3AP68431 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST1H3AP68431 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H3AP68431 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H3AP68431 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H3AP68431 AC092296.2-201ENST00000589470 999 ntBASIC21.26■□□□□ 0.99
HIST1H3AP68431 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST1H3AP68431 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H3AP68431 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H3AP68431 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H3AP68431 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H3AP68431 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.25■□□□□ 0.99
HIST1H3AP68431 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.25■□□□□ 0.99
HIST1H3AP68431 AC025884.2-201ENST00000553429 711 ntBASIC21.25■□□□□ 0.99
HIST1H3AP68431 ERN1-208ENST00000606895 2068 ntBASIC21.25■□□□□ 0.99
HIST1H3AP68431 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.25■□□□□ 0.99
HIST1H3AP68431 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HIST1H3AP68431 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST1H3AP68431 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST1H3AP68431 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.23■□□□□ 0.99
HIST1H3AP68431 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
HIST1H3AP68431 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST1H3AP68431 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HIST1H3AP68431 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST1H3AP68431 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.22■□□□□ 0.99
HIST1H3AP68431 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HIST1H3AP68431 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.21■□□□□ 0.99
HIST1H3AP68431 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.2■□□□□ 0.98
HIST1H3AP68431 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST1H3AP68431 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIST1H3AP68431 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HIST1H3AP68431 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.19■□□□□ 0.98
HIST1H3AP68431 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H3AP68431 ECEL1P2-201ENST00000461596 1295 ntBASIC21.19■□□□□ 0.98
HIST1H3AP68431 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HIST1H3AP68431 AC022413.1-201ENST00000624602 984 ntBASIC21.19■□□□□ 0.98
HIST1H3AP68431 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H3AP68431 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H3AP68431 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.19■□□□□ 0.98
HIST1H3AP68431 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H3AP68431 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms