Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
YBX1P67809 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.8■■□□□ 1.4
YBX1P67809 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
YBX1P67809 AC092296.2-201ENST00000589470 999 ntBASIC23.8■■□□□ 1.4
YBX1P67809 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
YBX1P67809 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
YBX1P67809 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
YBX1P67809 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
YBX1P67809 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
YBX1P67809 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.79■■□□□ 1.4
YBX1P67809 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
YBX1P67809 AC126177.7-201ENST00000547904 679 ntBASIC23.79■■□□□ 1.4
YBX1P67809 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.79■■□□□ 1.4
YBX1P67809 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.79■■□□□ 1.4
YBX1P67809 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
YBX1P67809 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
YBX1P67809 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.79■■□□□ 1.4
YBX1P67809 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
YBX1P67809 AL359504.2-201ENST00000605506 1601 ntBASIC23.78■■□□□ 1.4
YBX1P67809 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.78■■□□□ 1.4
YBX1P67809 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
YBX1P67809 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
YBX1P67809 AP004609.3-201ENST00000610705 1884 ntBASIC23.77■■□□□ 1.4
YBX1P67809 AC020928.2-201ENST00000588717 2197 ntBASIC23.77■■□□□ 1.4
YBX1P67809 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
YBX1P67809 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
YBX1P67809 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.77■■□□□ 1.4
YBX1P67809 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
YBX1P67809 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.76■■□□□ 1.39
YBX1P67809 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.76■■□□□ 1.39
YBX1P67809 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
YBX1P67809 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
YBX1P67809 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
YBX1P67809 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
YBX1P67809 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
YBX1P67809 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.75■■□□□ 1.39
YBX1P67809 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.74■■□□□ 1.39
YBX1P67809 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.74■■□□□ 1.39
YBX1P67809 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
YBX1P67809 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
YBX1P67809 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
YBX1P67809 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
YBX1P67809 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.73■■□□□ 1.39
YBX1P67809 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
YBX1P67809 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
YBX1P67809 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
YBX1P67809 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.72■■□□□ 1.39
YBX1P67809 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
YBX1P67809 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
YBX1P67809 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.72■■□□□ 1.39
YBX1P67809 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
YBX1P67809 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.71■■□□□ 1.39
YBX1P67809 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
YBX1P67809 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.71■■□□□ 1.39
YBX1P67809 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.71■■□□□ 1.39
YBX1P67809 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
YBX1P67809 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
YBX1P67809 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.7■■□□□ 1.39
YBX1P67809 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.7■■□□□ 1.38
YBX1P67809 AC145676.1-201ENST00000514988 2004 ntBASIC23.7■■□□□ 1.38
YBX1P67809 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
YBX1P67809 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
YBX1P67809 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
YBX1P67809 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
YBX1P67809 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
YBX1P67809 RNF126P1-201ENST00000567452 1320 ntBASIC23.69■■□□□ 1.38
YBX1P67809 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
YBX1P67809 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.69■■□□□ 1.38
YBX1P67809 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
YBX1P67809 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
YBX1P67809 AC142472.1-201ENST00000612013 1741 ntBASIC23.69■■□□□ 1.38
YBX1P67809 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
YBX1P67809 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
YBX1P67809 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
YBX1P67809 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.68■■□□□ 1.38
YBX1P67809 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
YBX1P67809 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.68■■□□□ 1.38
YBX1P67809 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.68■■□□□ 1.38
YBX1P67809 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.68■■□□□ 1.38
YBX1P67809 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
YBX1P67809 ECEL1P2-201ENST00000461596 1295 ntBASIC23.67■■□□□ 1.38
YBX1P67809 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
YBX1P67809 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.67■■□□□ 1.38
YBX1P67809 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
YBX1P67809 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
YBX1P67809 RARRES2P2-201ENST00000394842 485 ntBASIC23.66■■□□□ 1.38
YBX1P67809 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
YBX1P67809 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
YBX1P67809 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
YBX1P67809 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
YBX1P67809 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.65■■□□□ 1.38
YBX1P67809 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
YBX1P67809 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.65■■□□□ 1.38
YBX1P67809 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.64■■□□□ 1.38
YBX1P67809 AC025884.2-201ENST00000553429 711 ntBASIC23.64■■□□□ 1.37
YBX1P67809 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
YBX1P67809 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.64■■□□□ 1.37
YBX1P67809 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
YBX1P67809 SMPD5-203ENST00000639008 1464 ntBASIC23.63■■□□□ 1.37
YBX1P67809 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms