Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.9■□□□□ 0.78
Cldn18P56857 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn18P56857 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn18P56857 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn18P56857 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn18P56857 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn18P56857 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cldn18P56857 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn18P56857 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
Cldn18P56857 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn18P56857 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.89■□□□□ 0.77
Cldn18P56857 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn18P56857 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn18P56857 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn18P56857 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn18P56857 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn18P56857 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn18P56857 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn18P56857 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.87■□□□□ 0.77
Cldn18P56857 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn18P56857 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.87■□□□□ 0.77
Cldn18P56857 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.87■□□□□ 0.77
Cldn18P56857 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn18P56857 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn18P56857 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn18P56857 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn18P56857 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn18P56857 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn18P56857 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn18P56857 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cldn18P56857 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn18P56857 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cldn18P56857 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn18P56857 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn18P56857 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldn18P56857 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn18P56857 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldn18P56857 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn18P56857 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn18P56857 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn18P56857 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn18P56857 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn18P56857 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn18P56857 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn18P56857 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Cldn18P56857 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn18P56857 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn18P56857 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn18P56857 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn18P56857 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.83■□□□□ 0.76
Cldn18P56857 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn18P56857 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.82■□□□□ 0.76
Cldn18P56857 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.82■□□□□ 0.76
Cldn18P56857 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn18P56857 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn18P56857 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn18P56857 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn18P56857 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn18P56857 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn18P56857 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.81■□□□□ 0.76
Cldn18P56857 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cldn18P56857 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Cldn18P56857 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn18P56857 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.79■□□□□ 0.76
Cldn18P56857 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn18P56857 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.79■□□□□ 0.76
Cldn18P56857 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn18P56857 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn18P56857 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn18P56857 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn18P56857 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn18P56857 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cldn18P56857 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn18P56857 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn18P56857 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn18P56857 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.77■□□□□ 0.76
Cldn18P56857 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.77■□□□□ 0.76
Cldn18P56857 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cldn18P56857 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cldn18P56857 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn18P56857 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Cldn18P56857 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn18P56857 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn18P56857 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn18P56857 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn18P56857 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn18P56857 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cldn18P56857 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn18P56857 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.74■□□□□ 0.75
Cldn18P56857 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.74■□□□□ 0.75
Cldn18P56857 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn18P56857 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn18P56857 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn18P56857 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn18P56857 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn18P56857 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn18P56857 Gm10420-201ENSMUST00000121713 882 ntBASIC19.73■□□□□ 0.75
Cldn18P56857 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cldn18P56857 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn18P56857 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms