Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CckbrP56481 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CckbrP56481 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CckbrP56481 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CckbrP56481 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.39■□□□□ 0.85
CckbrP56481 Gm27502-201ENSMUST00000183495 199 ntBASIC20.39■□□□□ 0.85
CckbrP56481 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CckbrP56481 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CckbrP56481 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.39■□□□□ 0.85
CckbrP56481 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.38■□□□□ 0.85
CckbrP56481 Gm12366-201ENSMUST00000121722 873 ntBASIC20.38■□□□□ 0.85
CckbrP56481 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.38■□□□□ 0.85
CckbrP56481 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.38■□□□□ 0.85
CckbrP56481 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.38■□□□□ 0.85
CckbrP56481 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CckbrP56481 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.38■□□□□ 0.85
CckbrP56481 Gm5786-201ENSMUST00000085368 882 ntBASIC20.38■□□□□ 0.85
CckbrP56481 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CckbrP56481 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.37■□□□□ 0.85
CckbrP56481 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CckbrP56481 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CckbrP56481 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CckbrP56481 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CckbrP56481 Gm7332-201ENSMUST00000118351 454 ntBASIC20.36■□□□□ 0.85
CckbrP56481 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CckbrP56481 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CckbrP56481 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CckbrP56481 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CckbrP56481 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CckbrP56481 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CckbrP56481 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CckbrP56481 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CckbrP56481 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.34■□□□□ 0.85
CckbrP56481 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CckbrP56481 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CckbrP56481 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CckbrP56481 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CckbrP56481 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CckbrP56481 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CckbrP56481 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CckbrP56481 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CckbrP56481 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CckbrP56481 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CckbrP56481 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CckbrP56481 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CckbrP56481 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CckbrP56481 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.32■□□□□ 0.84
CckbrP56481 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CckbrP56481 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
CckbrP56481 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CckbrP56481 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CckbrP56481 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CckbrP56481 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CckbrP56481 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CckbrP56481 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CckbrP56481 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CckbrP56481 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CckbrP56481 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CckbrP56481 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.3■□□□□ 0.84
CckbrP56481 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.3■□□□□ 0.84
CckbrP56481 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CckbrP56481 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CckbrP56481 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CckbrP56481 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CckbrP56481 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CckbrP56481 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CckbrP56481 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CckbrP56481 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CckbrP56481 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.29■□□□□ 0.84
CckbrP56481 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CckbrP56481 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CckbrP56481 Cap2-205ENSMUST00000225824 1634 ntBASIC20.27■□□□□ 0.84
CckbrP56481 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CckbrP56481 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CckbrP56481 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CckbrP56481 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.27■□□□□ 0.84
CckbrP56481 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CckbrP56481 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CckbrP56481 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CckbrP56481 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CckbrP56481 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CckbrP56481 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.25■□□□□ 0.83
CckbrP56481 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CckbrP56481 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CckbrP56481 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CckbrP56481 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CckbrP56481 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CckbrP56481 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CckbrP56481 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CckbrP56481 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CckbrP56481 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CckbrP56481 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms