Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.76■■□□□ 1.396e-6■■■■■ 27.5
NCBP2P52298 PNCK-227ENST00000475172 877 ntTSL 522.68■■□□□ 1.226e-6■■■■■ 27.5
NCBP2P52298 REPIN1-206ENST00000469309 910 ntTSL 222.42■■□□□ 1.186e-6■■■■■ 27.5
NCBP2P52298 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.176e-6■■■■■ 27.5
NCBP2P52298 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.176e-6■■■■■ 27.5
NCBP2P52298 REPIN1-219ENST00000522266 480 ntTSL 221.74■■□□□ 1.076e-6■■■■■ 27.5
NCBP2P52298 REPIN1-215ENST00000495535 672 ntTSL 321.74■■□□□ 1.076e-6■■■■■ 27.5
NCBP2P52298 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.52■■□□□ 1.046e-6■■■■■ 27.5
NCBP2P52298 ANKRD12-206ENST00000577992 390 ntTSL 320.92■□□□□ 0.946e-6■■■■■ 27.5
NCBP2P52298 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.856e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-201ENST00000352800 611 ntTSL 520.23■□□□□ 0.834e-11■■■■■ 27.5
NCBP2P52298 GSE1-204ENST00000411612 872 ntTSL 519.97■□□□□ 0.792e-6■■■■■ 27.5
NCBP2P52298 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.776e-6■■■■■ 27.5
NCBP2P52298 PNCK-221ENST00000466074 1564 ntTSL 219.24■□□□□ 0.676e-6■■■■■ 27.5
NCBP2P52298 PTBP1-207ENST00000585932 1030 ntTSL 319.06■□□□□ 0.646e-6■■■■■ 27.5
NCBP2P52298 GSE1-216ENST00000637419 2683 ntTSL 518.76■□□□□ 0.593e-6■■■■■ 27.5
NCBP2P52298 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.526e-6■■■■■ 27.5
NCBP2P52298 CLCN7-213ENST00000567836 647 ntTSL 218.23■□□□□ 0.516e-6■■■■■ 27.5
NCBP2P52298 PNCK-218ENST00000462280 704 ntTSL 318.09■□□□□ 0.496e-6■■■■■ 27.5
NCBP2P52298 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.486e-6■■■■■ 27.5
NCBP2P52298 REPIN1-213ENST00000488943 1262 ntTSL 517.99■□□□□ 0.476e-6■■■■■ 27.5
NCBP2P52298 PTBP1-219ENST00000621737 1125 ntTSL 517.99■□□□□ 0.476e-6■■■■■ 27.5
NCBP2P52298 REPIN1-208ENST00000475514 1192 ntTSL 517.94■□□□□ 0.466e-6■■■■■ 27.5
NCBP2P52298 REPIN1-207ENST00000473391 1064 ntTSL 217.92■□□□□ 0.466e-6■■■■■ 27.5
NCBP2P52298 PFKL-210ENST00000496824 1063 ntTSL 517.72■□□□□ 0.439e-8■■■■■ 27.5
NCBP2P52298 PTBP1-208ENST00000585956 767 ntTSL 317.52■□□□□ 0.46e-6■■■■■ 27.5
NCBP2P52298 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.42■□□□□ 0.386e-6■■■■■ 27.5
NCBP2P52298 PNCK-231ENST00000488994 1437 ntTSL 217.38■□□□□ 0.376e-6■■■■■ 27.5
NCBP2P52298 PNCK-209ENST00000423545 448 ntTSL 417.24■□□□□ 0.356e-6■■■■■ 27.5
NCBP2P52298 PNCK-224ENST00000472324 2143 ntTSL 1 (best)16.73■□□□□ 0.276e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-225ENST00000636187 171 ntTSL 516.71■□□□□ 0.274e-11■■■■■ 27.5
NCBP2P52298 PNCK-220ENST00000465303 868 ntTSL 416.7■□□□□ 0.266e-6■■■■■ 27.5
NCBP2P52298 REPIN1-216ENST00000518462 621 ntTSL 416.66■□□□□ 0.266e-6■■■■■ 27.5
NCBP2P52298 PNCK-207ENST00000419804 561 ntTSL 416.43■□□□□ 0.226e-6■■■■■ 27.5
NCBP2P52298 TOX4-201ENST00000416256 724 ntTSL 516.28■□□□□ 0.25e-10■■■■■ 27.5
NCBP2P52298 TBL1XR1-204ENST00000422442 564 ntTSL 516.12■□□□□ 0.174e-11■■■■■ 27.5
NCBP2P52298 PNCK-219ENST00000463548 783 ntTSL 516.12■□□□□ 0.176e-6■■■■■ 27.5
NCBP2P52298 ANO9-208ENST00000534161 2158 ntTSL 216.09■□□□□ 0.176e-6■■■■■ 27.5
NCBP2P52298 PNCK-206ENST00000418241 566 ntTSL 315.9■□□□□ 0.146e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-203ENST00000422066 604 ntTSL 415.9■□□□□ 0.144e-11■■■■■ 27.5
NCBP2P52298 TBL1XR1-209ENST00000431421 550 ntTSL 415.9■□□□□ 0.144e-11■■■■■ 27.5
NCBP2P52298 PNCK-230ENST00000488168 976 ntTSL 315.83■□□□□ 0.126e-6■■■■■ 27.5
NCBP2P52298 TOX4-209ENST00000487242 544 ntTSL 215.82■□□□□ 0.125e-10■■■■■ 27.5
NCBP2P52298 TOX4-204ENST00000455138 549 ntTSL 415.73■□□□□ 0.115e-10■■■■■ 27.5
NCBP2P52298 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.16e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-219ENST00000627825 312 ntTSL 515.66■□□□□ 0.14e-11■■■■■ 27.5
NCBP2P52298 TBL1XR1-217ENST00000626672 568 ntTSL 415.66■□□□□ 0.14e-11■■■■■ 27.5
NCBP2P52298 SKIV2L-210ENST00000484835 931 ntTSL 215.66■□□□□ 0.16e-6■■■■■ 27.5
NCBP2P52298 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.63■□□□□ 0.096e-6■■■■■ 27.5
NCBP2P52298 CLCN7-209ENST00000565092 2740 ntTSL 215.6■□□□□ 0.096e-6■■■■■ 27.5
NCBP2P52298 TOX4-202ENST00000447695 633 ntTSL 415.49■□□□□ 0.075e-10■■■■■ 27.5
NCBP2P52298 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.076e-6■■■■■ 27.5
NCBP2P52298 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.43■□□□□ 0.066e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-210ENST00000431674 559 ntTSL 415.32■□□□□ 0.044e-11■■■■■ 27.5
NCBP2P52298 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.046e-6■■■■■ 27.5
NCBP2P52298 JMJD1C-211ENST00000633035 499 ntTSL 315.26■□□□□ 0.034e-9■■■■■ 27.5
NCBP2P52298 PNCK-222ENST00000466638 1204 ntTSL 215.25■□□□□ 0.036e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-213ENST00000450267 588 ntTSL 315.25■□□□□ 0.034e-11■■■■■ 27.5
NCBP2P52298 TBL1XR1-206ENST00000427349 554 ntTSL 315.23■□□□□ 0.034e-11■■■■■ 27.5
NCBP2P52298 TBL1XR1-202ENST00000413084 592 ntTSL 415.23■□□□□ 0.034e-11■■■■■ 27.5
NCBP2P52298 ANO9-205ENST00000526142 2868 ntTSL 215.17■□□□□ 0.026e-6■■■■■ 27.5
NCBP2P52298 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.019e-10■■■■■ 27.5
NCBP2P52298 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.036e-6■■■■■ 27.5
NCBP2P52298 SKIV2L-209ENST00000483553 1307 ntTSL 514.86□□□□□ -0.036e-6■■■■■ 27.5
NCBP2P52298 PNCK-210ENST00000425526 725 ntTSL 514.71□□□□□ -0.056e-6■■■■■ 27.5
NCBP2P52298 SKIV2L-204ENST00000465703 4507 ntTSL 1 (best)14.64□□□□□ -0.076e-6■■■■■ 27.5
NCBP2P52298 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.6□□□□□ -0.076e-6■■■■■ 27.5
NCBP2P52298 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.076e-6■■■■■ 27.5
NCBP2P52298 TOX4-210ENST00000494242 650 ntTSL 314.45□□□□□ -0.15e-10■■■■■ 27.5
NCBP2P52298 REPIN1-218ENST00000519397 583 ntTSL 413.76□□□□□ -0.216e-6■■■■■ 27.5
NCBP2P52298 PNCK-232ENST00000489536 836 ntTSL 213.35□□□□□ -0.276e-6■■■■■ 27.5
NCBP2P52298 PNCK-214ENST00000439087 754 ntTSL 513.33□□□□□ -0.286e-6■■■■■ 27.5
NCBP2P52298 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.292e-6■■■■■ 27.5
NCBP2P52298 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.32e-6■■■■■ 27.5
NCBP2P52298 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.99□□□□□ -0.336e-6■■■■■ 27.5
NCBP2P52298 TOX4-205ENST00000455393 2000 ntTSL 212.94□□□□□ -0.345e-10■■■■■ 27.5
NCBP2P52298 CLCN7-205ENST00000563642 4184 ntTSL 212.88□□□□□ -0.356e-6■■■■■ 27.5
NCBP2P52298 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.362e-6■■■■■ 27.5
NCBP2P52298 PNCK-211ENST00000433470 717 ntTSL 512.77□□□□□ -0.376e-6■■■■■ 27.5
NCBP2P52298 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.7□□□□□ -0.386e-6■■■■■ 27.5
NCBP2P52298 ANKRD12-209ENST00000585234 313 ntTSL 312.61□□□□□ -0.396e-6■■■■■ 27.5
NCBP2P52298 ANKRD12-204ENST00000540578 1338 ntTSL 1 (best)12.59□□□□□ -0.396e-6■■■■■ 27.5
NCBP2P52298 SKIV2L-215ENST00000494058 867 ntTSL 212.28□□□□□ -0.446e-6■■■■■ 27.5
NCBP2P52298 TOX4-206ENST00000457430 565 ntTSL 412.16□□□□□ -0.465e-10■■■■■ 27.5
NCBP2P52298 ZNF652-203ENST00000508237 4543 ntTSL 212.07□□□□□ -0.486e-6■■■■■ 27.5
NCBP2P52298 REPIN1-211ENST00000486714 824 ntTSL 511.82□□□□□ -0.526e-6■■■■■ 27.5
NCBP2P52298 GSE1-215ENST00000635906 666 ntTSL 311.56□□□□□ -0.562e-6■■■■■ 27.5
NCBP2P52298 SKIV2L-208ENST00000474839 3378 ntTSL 211.39□□□□□ -0.596e-6■■■■■ 27.5
NCBP2P52298 TBL1XR1-214ENST00000457928 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.714e-11■■■■■ 27.5
NCBP2P52298 UBR4-210ENST00000466969 510 ntTSL 210.56□□□□□ -0.726e-6■■■■■ 27.5
NCBP2P52298 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.736e-6■■■■■ 27.5
NCBP2P52298 ANKRD12-207ENST00000581635 631 ntTSL 410.46□□□□□ -0.736e-6■■■■■ 27.5
NCBP2P52298 PTBP1-205ENST00000585535 314 ntTSL 310.43□□□□□ -0.746e-6■■■■■ 27.5
NCBP2P52298 SKIV2L-203ENST00000461915 691 ntTSL 510.37□□□□□ -0.756e-6■■■■■ 27.5
NCBP2P52298 TUBA1C-209ENST00000552448 1800 ntTSL 310.15□□□□□ -0.786e-6■■■■■ 27.5
NCBP2P52298 TUBA1C-208ENST00000552125 575 ntTSL 49.76□□□□□ -0.856e-6■■■■■ 27.5
NCBP2P52298 TOX4-203ENST00000448790 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.875e-10■■■■■ 27.5
NCBP2P52298 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC9.61□□□□□ -0.876e-6■■■■■ 27.5
NCBP2P52298 TOX4-211ENST00000613005 3633 ntTSL 29.56□□□□□ -0.885e-10■■■■■ 27.5
NCBP2P52298 PNCK-205ENST00000411968 557 ntTSL 59.4□□□□□ -0.96e-6■■■■■ 27.5
Retrieved 100 of 18,329 protein–RNA pairs in 296.7 ms