Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.15■□□□□ 0.98
GSK3AP49840 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GSK3AP49840 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
GSK3AP49840 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GSK3AP49840 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GSK3AP49840 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
GSK3AP49840 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.14■□□□□ 0.97
GSK3AP49840 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GSK3AP49840 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.14■□□□□ 0.97
GSK3AP49840 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GSK3AP49840 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
GSK3AP49840 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GSK3AP49840 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
GSK3AP49840 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
GSK3AP49840 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
GSK3AP49840 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.13■□□□□ 0.97
GSK3AP49840 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GSK3AP49840 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
GSK3AP49840 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GSK3AP49840 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GSK3AP49840 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.13■□□□□ 0.97
GSK3AP49840 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.13■□□□□ 0.97
GSK3AP49840 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GSK3AP49840 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GSK3AP49840 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GSK3AP49840 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GSK3AP49840 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GSK3AP49840 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GSK3AP49840 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GSK3AP49840 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.11■□□□□ 0.97
GSK3AP49840 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
GSK3AP49840 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GSK3AP49840 AC126177.7-201ENST00000547904 679 ntBASIC21.11■□□□□ 0.97
GSK3AP49840 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
GSK3AP49840 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
GSK3AP49840 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GSK3AP49840 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GSK3AP49840 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GSK3AP49840 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GSK3AP49840 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
GSK3AP49840 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GSK3AP49840 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.1■□□□□ 0.97
GSK3AP49840 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.1■□□□□ 0.97
GSK3AP49840 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GSK3AP49840 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.1■□□□□ 0.97
GSK3AP49840 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.1■□□□□ 0.97
GSK3AP49840 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GSK3AP49840 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.09■□□□□ 0.97
GSK3AP49840 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GSK3AP49840 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GSK3AP49840 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.09■□□□□ 0.97
GSK3AP49840 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.09■□□□□ 0.97
GSK3AP49840 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
GSK3AP49840 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GSK3AP49840 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GSK3AP49840 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GSK3AP49840 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GSK3AP49840 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
GSK3AP49840 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
GSK3AP49840 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GSK3AP49840 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
GSK3AP49840 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GSK3AP49840 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
GSK3AP49840 AL359504.2-201ENST00000605506 1601 ntBASIC21.07■□□□□ 0.96
GSK3AP49840 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.07■□□□□ 0.96
GSK3AP49840 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSK3AP49840 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSK3AP49840 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSK3AP49840 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSK3AP49840 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSK3AP49840 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.06■□□□□ 0.96
GSK3AP49840 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.06■□□□□ 0.96
GSK3AP49840 MIR639-201ENST00000384974 98 ntBASIC21.06■□□□□ 0.96
GSK3AP49840 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
GSK3AP49840 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSK3AP49840 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSK3AP49840 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSK3AP49840 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GSK3AP49840 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.04■□□□□ 0.96
GSK3AP49840 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSK3AP49840 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.04■□□□□ 0.96
GSK3AP49840 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSK3AP49840 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.04■□□□□ 0.96
GSK3AP49840 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
GSK3AP49840 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSK3AP49840 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.03■□□□□ 0.96
GSK3AP49840 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.03■□□□□ 0.96
GSK3AP49840 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
GSK3AP49840 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GSK3AP49840 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms