Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC34P49427 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.11■□□□□ 0.65
CDC34P49427 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDC34P49427 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.11■□□□□ 0.65
CDC34P49427 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC34P49427 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC34P49427 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC34P49427 AC138932.3-201ENST00000567634 1902 ntBASIC19.1■□□□□ 0.65
CDC34P49427 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDC34P49427 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC34P49427 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC34P49427 AC022211.4-201ENST00000625094 2161 ntBASIC19.1■□□□□ 0.65
CDC34P49427 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC34P49427 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.09■□□□□ 0.65
CDC34P49427 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC34P49427 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.09■□□□□ 0.65
CDC34P49427 WHAMMP3-201ENST00000611636 1609 ntBASIC19.09■□□□□ 0.65
CDC34P49427 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC34P49427 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.09■□□□□ 0.65
CDC34P49427 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDC34P49427 CAHM-201ENST00000604200 896 ntBASIC19.08■□□□□ 0.64
CDC34P49427 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDC34P49427 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDC34P49427 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDC34P49427 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.07■□□□□ 0.64
CDC34P49427 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDC34P49427 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDC34P49427 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDC34P49427 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDC34P49427 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDC34P49427 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDC34P49427 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDC34P49427 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDC34P49427 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDC34P49427 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDC34P49427 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.05■□□□□ 0.64
CDC34P49427 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.05■□□□□ 0.64
CDC34P49427 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDC34P49427 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDC34P49427 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.05■□□□□ 0.64
CDC34P49427 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDC34P49427 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDC34P49427 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDC34P49427 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC34P49427 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDC34P49427 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.03■□□□□ 0.64
CDC34P49427 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CDC34P49427 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 MIR762-201ENST00000390236 83 ntBASIC19.03■□□□□ 0.64
CDC34P49427 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CDC34P49427 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.03■□□□□ 0.64
CDC34P49427 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDC34P49427 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC34P49427 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDC34P49427 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDC34P49427 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CDC34P49427 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.02■□□□□ 0.64
CDC34P49427 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDC34P49427 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CDC34P49427 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDC34P49427 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
CDC34P49427 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.01■□□□□ 0.63
CDC34P49427 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC34P49427 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC34P49427 AC108673.1-201ENST00000510422 1159 ntBASIC19.01■□□□□ 0.63
CDC34P49427 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC34P49427 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDC34P49427 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC34P49427 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDC34P49427 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDC34P49427 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC34P49427 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CDC34P49427 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDC34P49427 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19■□□□□ 0.63
CDC34P49427 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC34P49427 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19■□□□□ 0.63
CDC34P49427 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC34P49427 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC34P49427 AC133561.1-201ENST00000568600 2415 ntBASIC18.99■□□□□ 0.63
CDC34P49427 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.99■□□□□ 0.63
CDC34P49427 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC34P49427 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC34P49427 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC34P49427 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC34P49427 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC34P49427 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC34P49427 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
CDC34P49427 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CDC34P49427 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC34P49427 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC34P49427 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC34P49427 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC34P49427 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms