Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.25■□□□□ 0.51
Hmx3P42581 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.25■□□□□ 0.51
Hmx3P42581 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.25■□□□□ 0.51
Hmx3P42581 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.25■□□□□ 0.51
Hmx3P42581 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmx3P42581 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Hmx3P42581 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmx3P42581 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmx3P42581 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Hmx3P42581 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmx3P42581 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmx3P42581 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmx3P42581 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmx3P42581 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmx3P42581 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmx3P42581 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hmx3P42581 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmx3P42581 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmx3P42581 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmx3P42581 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.22■□□□□ 0.51
Hmx3P42581 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmx3P42581 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmx3P42581 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmx3P42581 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmx3P42581 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmx3P42581 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmx3P42581 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmx3P42581 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmx3P42581 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmx3P42581 Gm6821-201ENSMUST00000107540 542 ntBASIC18.19■□□□□ 0.5
Hmx3P42581 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmx3P42581 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hmx3P42581 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmx3P42581 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmx3P42581 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmx3P42581 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hmx3P42581 Particl-201ENSMUST00000205370 1560 ntBASIC18.18■□□□□ 0.5
Hmx3P42581 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmx3P42581 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmx3P42581 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmx3P42581 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hmx3P42581 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmx3P42581 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.18■□□□□ 0.5
Hmx3P42581 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hmx3P42581 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmx3P42581 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmx3P42581 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Hmx3P42581 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmx3P42581 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmx3P42581 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.17■□□□□ 0.5
Hmx3P42581 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.17■□□□□ 0.5
Hmx3P42581 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmx3P42581 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmx3P42581 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmx3P42581 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Hmx3P42581 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmx3P42581 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmx3P42581 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmx3P42581 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmx3P42581 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmx3P42581 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmx3P42581 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmx3P42581 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmx3P42581 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.14■□□□□ 0.49
Hmx3P42581 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmx3P42581 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmx3P42581 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmx3P42581 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hmx3P42581 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmx3P42581 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmx3P42581 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmx3P42581 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.13■□□□□ 0.49
Hmx3P42581 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmx3P42581 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmx3P42581 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmx3P42581 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmx3P42581 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmx3P42581 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmx3P42581 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Hmx3P42581 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmx3P42581 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmx3P42581 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmx3P42581 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hmx3P42581 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.11■□□□□ 0.49
Hmx3P42581 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Hmx3P42581 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmx3P42581 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmx3P42581 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Hmx3P42581 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmx3P42581 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.09■□□□□ 0.49
Hmx3P42581 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmx3P42581 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms