Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rom1P32958 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.53■□□□□ 0.4
Rom1P32958 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rom1P32958 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rom1P32958 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.52■□□□□ 0.4
Rom1P32958 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rom1P32958 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rom1P32958 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rom1P32958 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.51■□□□□ 0.39
Rom1P32958 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rom1P32958 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.5■□□□□ 0.39
Rom1P32958 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.5■□□□□ 0.39
Rom1P32958 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rom1P32958 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Rom1P32958 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rom1P32958 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rom1P32958 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rom1P32958 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rom1P32958 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rom1P32958 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Rom1P32958 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.48■□□□□ 0.39
Rom1P32958 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.47■□□□□ 0.39
Rom1P32958 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rom1P32958 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.47■□□□□ 0.39
Rom1P32958 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rom1P32958 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rom1P32958 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rom1P32958 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.46■□□□□ 0.39
Rom1P32958 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rom1P32958 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.46■□□□□ 0.39
Rom1P32958 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rom1P32958 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rom1P32958 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.45■□□□□ 0.38
Rom1P32958 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.45■□□□□ 0.38
Rom1P32958 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rom1P32958 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.44■□□□□ 0.38
Rom1P32958 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rom1P32958 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rom1P32958 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rom1P32958 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rom1P32958 Gm37136-201ENSMUST00000194368 194 ntBASIC17.42■□□□□ 0.38
Rom1P32958 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rom1P32958 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rom1P32958 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rom1P32958 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.41■□□□□ 0.38
Rom1P32958 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.41■□□□□ 0.38
Rom1P32958 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.41■□□□□ 0.38
Rom1P32958 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rom1P32958 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.4■□□□□ 0.38
Rom1P32958 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rom1P32958 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rom1P32958 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rom1P32958 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rom1P32958 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rom1P32958 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rom1P32958 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rom1P32958 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rom1P32958 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rom1P32958 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.38■□□□□ 0.37
Rom1P32958 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rom1P32958 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms