Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.54■■□□□ 1.2
Slc6a13P31649 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a13P31649 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a13P31649 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.54■■□□□ 1.2
Slc6a13P31649 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a13P31649 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a13P31649 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.53■■□□□ 1.2
Slc6a13P31649 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a13P31649 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a13P31649 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
Slc6a13P31649 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a13P31649 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Slc6a13P31649 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Slc6a13P31649 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a13P31649 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a13P31649 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a13P31649 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Slc6a13P31649 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Slc6a13P31649 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a13P31649 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a13P31649 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a13P31649 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a13P31649 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Slc6a13P31649 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.5■■□□□ 1.19
Slc6a13P31649 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a13P31649 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a13P31649 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.5■■□□□ 1.19
Slc6a13P31649 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a13P31649 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a13P31649 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a13P31649 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a13P31649 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a13P31649 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a13P31649 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a13P31649 Gm14523-201ENSMUST00000117260 558 ntBASIC22.49■■□□□ 1.19
Slc6a13P31649 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.49■■□□□ 1.19
Slc6a13P31649 Gm12366-201ENSMUST00000121722 873 ntBASIC22.49■■□□□ 1.19
Slc6a13P31649 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.49■■□□□ 1.19
Slc6a13P31649 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.49■■□□□ 1.19
Slc6a13P31649 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.49■■□□□ 1.19
Slc6a13P31649 Gm5786-201ENSMUST00000085368 882 ntBASIC22.49■■□□□ 1.19
Slc6a13P31649 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a13P31649 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a13P31649 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a13P31649 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Slc6a13P31649 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Slc6a13P31649 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.47■■□□□ 1.19
Slc6a13P31649 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.47■■□□□ 1.19
Slc6a13P31649 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Slc6a13P31649 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Slc6a13P31649 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Slc6a13P31649 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a13P31649 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a13P31649 Gm7332-201ENSMUST00000118351 454 ntBASIC22.45■■□□□ 1.18
Slc6a13P31649 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.45■■□□□ 1.18
Slc6a13P31649 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a13P31649 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a13P31649 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a13P31649 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Slc6a13P31649 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Slc6a13P31649 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.45■■□□□ 1.18
Slc6a13P31649 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a13P31649 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a13P31649 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a13P31649 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a13P31649 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.44■■□□□ 1.18
Slc6a13P31649 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.44■■□□□ 1.18
Slc6a13P31649 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a13P31649 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a13P31649 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Slc6a13P31649 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Slc6a13P31649 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Slc6a13P31649 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Slc6a13P31649 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.43■■□□□ 1.18
Slc6a13P31649 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Slc6a13P31649 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc6a13P31649 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Slc6a13P31649 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc6a13P31649 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc6a13P31649 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc6a13P31649 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc6a13P31649 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc6a13P31649 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Slc6a13P31649 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.41■■□□□ 1.18
Slc6a13P31649 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Slc6a13P31649 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Slc6a13P31649 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Slc6a13P31649 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Slc6a13P31649 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Slc6a13P31649 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Slc6a13P31649 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Slc6a13P31649 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.39■■□□□ 1.17
Slc6a13P31649 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Slc6a13P31649 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Slc6a13P31649 Cap2-205ENSMUST00000225824 1634 ntBASIC22.39■■□□□ 1.17
Slc6a13P31649 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Slc6a13P31649 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.38■■□□□ 1.17
Slc6a13P31649 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Slc6a13P31649 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc6a13P31649 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms