Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 LOT6YLR011W 576 nt5.17□□□□□ -1.58
RPB9P27999 PSR2YLR019W 1194 nt5.17□□□□□ -1.58
RPB9P27999 ECM30YLR436C 3825 nt5.17□□□□□ -1.58
RPB9P27999 EGD2YHR193C 525 nt5.16□□□□□ -1.58
RPB9P27999 BNA3YJL060W 1335 nt5.16□□□□□ -1.58
RPB9P27999 CRF1YDR223W 1404 nt5.15□□□□□ -1.58
RPB9P27999 YPL277CYPL277C 1464 nt5.15□□□□□ -1.58
RPB9P27999 MAK32YCR019W 1092 nt5.15□□□□□ -1.59
RPB9P27999 YCR041WYCR041W 333 nt5.15□□□□□ -1.59
RPB9P27999 YHR213W-AYHR213W-A 234 nt5.15□□□□□ -1.59
RPB9P27999 YJR146WYJR146W 354 nt5.15□□□□□ -1.59
RPB9P27999 OPI11YPR044C 354 nt5.15□□□□□ -1.59
RPB9P27999 PAC2YER007W 1557 nt5.15□□□□□ -1.59
RPB9P27999 ARE2YNR019W 1929 nt5.15□□□□□ -1.59
RPB9P27999 GPA1YHR005C 1419 nt5.14□□□□□ -1.59
RPB9P27999 RAD59YDL059C 717 nt5.14□□□□□ -1.59
RPB9P27999 YDL218WYDL218W 954 nt5.14□□□□□ -1.59
RPB9P27999 YGR068W-AYGR068W-A 96 nt5.14□□□□□ -1.59
RPB9P27999 ENV7YPL236C 1095 nt5.14□□□□□ -1.59
RPB9P27999 SNT309YPR101W 528 nt5.14□□□□□ -1.59
RPB9P27999 CIT3YPR001W 1461 nt5.13□□□□□ -1.59
RPB9P27999 PRY3YJL078C 2646 nt5.13□□□□□ -1.59
RPB9P27999 AMN1YBR158W 1650 nt5.13□□□□□ -1.59
RPB9P27999 YER137CYER137C 447 nt5.13□□□□□ -1.59
RPB9P27999 SYF2YGR129W 648 nt5.13□□□□□ -1.59
RPB9P27999 YHC3YJL059W 1227 nt5.13□□□□□ -1.59
RPB9P27999 DPH5YLR172C 903 nt5.13□□□□□ -1.59
RPB9P27999 GTO3YMR251W 1101 nt5.13□□□□□ -1.59
RPB9P27999 PTC4YBR125C 1182 nt5.13□□□□□ -1.59
RPB9P27999 ENB1YOL158C 1821 nt5.13□□□□□ -1.59
RPB9P27999 GPA2YER020W 1350 nt5.13□□□□□ -1.59
RPB9P27999 KSH1YNL024C-A 219 nt5.12□□□□□ -1.59
RPB9P27999 SNU71YGR013W 1863 nt5.11□□□□□ -1.59
RPB9P27999 RGT2YDL138W 2292 nt5.11□□□□□ -1.59
RPB9P27999 snR82snR82 268 nt5.11□□□□□ -1.59
RPB9P27999 YDR015CYDR015C 240 nt5.11□□□□□ -1.59
RPB9P27999 SDH4YDR178W 546 nt5.11□□□□□ -1.59
RPB9P27999 MRPL28YDR462W 444 nt5.11□□□□□ -1.59
RPB9P27999 YFL013W-AYFL013W-A 804 nt5.11□□□□□ -1.59
RPB9P27999 BUD32YGR262C 786 nt5.11□□□□□ -1.59
RPB9P27999 YLR112WYLR112W 420 nt5.11□□□□□ -1.59
RPB9P27999 GLC8YMR311C 690 nt5.11□□□□□ -1.59
RPB9P27999 PRB1YEL060C 1908 nt5.11□□□□□ -1.59
RPB9P27999 YGR054WYGR054W 1929 nt5.11□□□□□ -1.59
RPB9P27999 YDL085C-AYDL085C-A 207 nt5.1□□□□□ -1.59
RPB9P27999 CEM1YER061C 1329 nt5.1□□□□□ -1.59
RPB9P27999 STT3YGL022W 2157 nt5.1□□□□□ -1.59
RPB9P27999 PPT1YGR123C 1542 nt5.1□□□□□ -1.59
RPB9P27999 TPK1YJL164C 1194 nt5.1□□□□□ -1.59
RPB9P27999 MDE1YJR024C 735 nt5.1□□□□□ -1.59
RPB9P27999 GFA1YKL104C 2154 nt5.1□□□□□ -1.59
RPB9P27999 MIA40YKL195W 1212 nt5.1□□□□□ -1.59
RPB9P27999 PUS5YLR165C 765 nt5.1□□□□□ -1.59
RPB9P27999 SUR7YML052W 909 nt5.1□□□□□ -1.59
RPB9P27999 OGG1YML060W 1131 nt5.1□□□□□ -1.59
RPB9P27999 IRC11YOR013W 471 nt5.1□□□□□ -1.59
RPB9P27999 YBR056C-BYBR056C-B 159 nt5.1□□□□□ -1.59
RPB9P27999 ECM31YBR176W 939 nt5.1□□□□□ -1.59
RPB9P27999 RMD8YFR048W 1989 nt5.09□□□□□ -1.59
RPB9P27999 SKS1YPL026C 1509 nt5.09□□□□□ -1.59
RPB9P27999 MTF2YDL044C 1323 nt5.09□□□□□ -1.59
RPB9P27999 SHO1YER118C 1104 nt5.09□□□□□ -1.59
RPB9P27999 RDN5-2RDN5-2 119 nt5.09□□□□□ -1.59
RPB9P27999 RDN5-3RDN5-3 119 nt5.09□□□□□ -1.59
RPB9P27999 RDN5-4RDN5-4 119 nt5.09□□□□□ -1.59
RPB9P27999 RDN5-5RDN5-5 119 nt5.09□□□□□ -1.59
RPB9P27999 CSL4YNL232W 879 nt5.09□□□□□ -1.59
RPB9P27999 YNL285WYNL285W 372 nt5.09□□□□□ -1.59
RPB9P27999 DFR1YOR236W 636 nt5.09□□□□□ -1.59
RPB9P27999 YPL250W-AYPL250W-A 288 nt5.09□□□□□ -1.59
RPB9P27999 CDC16YKL022C 2523 nt5.08□□□□□ -1.6
RPB9P27999 AIM3YBR108W 2844 nt5.08□□□□□ -1.6
RPB9P27999 FHN1YGR131W 525 nt5.08□□□□□ -1.6
RPB9P27999 MTR3YGR158C 753 nt5.08□□□□□ -1.6
RPB9P27999 DOT5YIL010W 648 nt5.08□□□□□ -1.6
RPB9P27999 HMS2YJR147W 1077 nt5.08□□□□□ -1.6
RPB9P27999 DID2YKR035W-A 615 nt5.08□□□□□ -1.6
RPB9P27999 MEU1YLR017W 1014 nt5.08□□□□□ -1.6
RPB9P27999 SHP1YBL058W 1272 nt5.08□□□□□ -1.6
RPB9P27999 LDB16YCL005W 771 nt5.08□□□□□ -1.6
RPB9P27999 MAK31YCR020C-A 267 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)BtG(GCC)B 71 nt5.07□□□□□ -1.6
RPB9P27999 SUF16tG(GCC)C 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)D1tG(GCC)D1 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)D2tG(GCC)D2 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)EtG(GCC)E 71 nt5.07□□□□□ -1.6
RPB9P27999 SUF20tG(GCC)F1 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)F2tG(GCC)F2 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)G1tG(GCC)G1 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)G2tG(GCC)G2 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)J1tG(GCC)J1 71 nt5.07□□□□□ -1.6
RPB9P27999 SUF23tG(GCC)J2 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)MtG(GCC)M 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)O1tG(GCC)O1 71 nt5.07□□□□□ -1.6
RPB9P27999 SUF17tG(GCC)O2 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)P1tG(GCC)P1 71 nt5.07□□□□□ -1.6
RPB9P27999 tG(GCC)P2tG(GCC)P2 71 nt5.07□□□□□ -1.6
RPB9P27999 SNF4YGL115W 969 nt5.07□□□□□ -1.6
RPB9P27999 ERP2YAL007C 648 nt5.07□□□□□ -1.6
RPB9P27999 ECM19YLR390W 339 nt5.07□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms