Protein–RNA interactions for Protein: P26599

PTBP1, Polypyrimidine tract-binding protein 1, humanhuman

Known RBP eCLIP

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1P26599 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC6.9□□□□□ -1.36e-13■■■■■ 53.1
PTBP1P26599 ZNF678-204ENST00000465266 533 ntTSL 46.14□□□□□ -1.436e-13■■■■■ 53.1
PTBP1P26599 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.586e-13■■■■■ 53.1
PTBP1P26599 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.05□□□□□ -0.167e-11■■■■■ 53
PTBP1P26599 KIAA0391-204ENST00000557404 789 ntTSL 311.5□□□□□ -0.577e-11■■■■■ 53
PTBP1P26599 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC11.24□□□□□ -0.617e-11■■■■■ 53
PTBP1P26599 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC8.27□□□□□ -1.097e-11■■■■■ 53
PTBP1P26599 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.4□□□□□ -1.397e-11■■■■■ 53
PTBP1P26599 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.437e-11■■■■■ 53
PTBP1P26599 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.497e-11■■■■■ 53
PTBP1P26599 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.587e-11■■■■■ 53
PTBP1P26599 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.12■□□□□ 0.014e-8■■■■■ 53
PTBP1P26599 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.264e-8■■■■■ 53
PTBP1P26599 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.55□□□□□ -0.44e-8■■■■■ 53
PTBP1P26599 ATG5-209ENST00000636335 1219 ntTSL 512.23□□□□□ -0.454e-8■■■■■ 53
PTBP1P26599 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC11.01□□□□□ -0.654e-8■■■■■ 53
PTBP1P26599 ATG5-204ENST00000369076 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.684e-8■■■■■ 53
PTBP1P26599 ATG5-203ENST00000369070 3088 ntTSL 1 (best)10.54□□□□□ -0.724e-8■■■■■ 53
PTBP1P26599 ATG5-206ENST00000476518 602 ntTSL 32.31□□□□□ -2.044e-8■■■■■ 53
PTBP1P26599 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.02□□□□□ -2.094e-8■■■■■ 53
PTBP1P26599 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.028e-7■■■■■ 52.9
PTBP1P26599 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.03□□□□□ -0.324e-9■■■■■ 52.8
PTBP1P26599 NAA38-202ENST00000570555 783 ntTSL 59.92□□□□□ -0.824e-9■■■■■ 52.8
PTBP1P26599 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.42■■□□□ 1.182e-7■■■■■ 52.8
PTBP1P26599 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.74□□□□□ -1.652e-7■■■■■ 52.8
PTBP1P26599 RBM26-206ENST00000472143 2192 ntTSL 224.35■■□□□ 1.492e-37■■■■■ 52.8
PTBP1P26599 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.511e-8■■■■■ 52.8
PTBP1P26599 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.05□□□□□ -1.761e-8■■■■■ 52.8
PTBP1P26599 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.071e-10■■■■■ 52.7
PTBP1P26599 PDZD8-204ENST00000489491 289 ntTSL 22.55□□□□□ -21e-10■■■■■ 52.7
PTBP1P26599 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.34□□□□□ -0.271e-14■■■■■ 52.6
PTBP1P26599 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC7.36□□□□□ -1.231e-14■■■■■ 52.6
PTBP1P26599 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.211e-8■■■■■ 52.6
PTBP1P26599 EXT1-203ENST00000437196 1446 ntTSL 511.09□□□□□ -0.631e-8■■■■■ 52.6
PTBP1P26599 EXT1-202ENST00000436216 700 ntTSL 39.49□□□□□ -0.891e-8■■■■■ 52.6
PTBP1P26599 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC22.66■■□□□ 1.222e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 02e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.91□□□□□ -0.182e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-211ENST00000494437 976 ntTSL 313.89□□□□□ -0.192e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.192e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-209ENST00000476512 942 ntTSL 313.45□□□□□ -0.262e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-210ENST00000491346 1116 ntTSL 512.63□□□□□ -0.392e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.6□□□□□ -0.552e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.03□□□□□ -0.642e-11■■■■■ 52.4
PTBP1P26599 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.86□□□□□ -0.672e-11■■■■■ 52.4
PTBP1P26599 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.58□□□□□ -1.366e-31■■■■■ 52.4
PTBP1P26599 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.36□□□□□ -1.396e-31■■■■■ 52.4
PTBP1P26599 ICE2-203ENST00000558181 7060 ntTSL 1 (best)6.27□□□□□ -1.413e-7■■■■■ 52.3
PTBP1P26599 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.453e-7■■■■■ 52.3
PTBP1P26599 SVIL-213ENST00000632315 2889 ntTSL 510.51□□□□□ -0.734e-14■■■■■ 52.2
PTBP1P26599 SVIL-206ENST00000464984 645 ntTSL 36.66□□□□□ -1.344e-14■■■■■ 52.2
PTBP1P26599 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.485e-7■■■■■ 52.1
PTBP1P26599 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.89■□□□□ 0.295e-7■■■■■ 52.1
PTBP1P26599 SCARB1-206ENST00000539320 720 ntTSL 216.71■□□□□ 0.275e-7■■■■■ 52.1
PTBP1P26599 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.6■□□□□ 0.255e-7■■■■■ 52.1
PTBP1P26599 SCARB1-210ENST00000545493 581 ntTSL 215.86■□□□□ 0.135e-7■■■■■ 52.1
PTBP1P26599 SCARB1-205ENST00000538291 5527 ntTSL 515.28■□□□□ 0.045e-7■■■■■ 52.1
PTBP1P26599 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.84□□□□□ -0.035e-7■■■■■ 52.1
PTBP1P26599 SCARB1-204ENST00000535005 1845 ntTSL 1 (best)11.13□□□□□ -0.635e-7■■■■■ 52.1
PTBP1P26599 SCARB1-207ENST00000541661 476 ntTSL 59.69□□□□□ -0.865e-7■■■■■ 52.1
PTBP1P26599 NSMCE2-201ENST00000287437 1195 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.153e-7■■■■■ 52.1
PTBP1P26599 NSMCE2-203ENST00000517532 841 ntTSL 57.05□□□□□ -1.283e-7■■■■■ 52.1
PTBP1P26599 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.84□□□□□ -1.633e-7■■■■■ 52.1
PTBP1P26599 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.773e-7■■■■■ 52.1
PTBP1P26599 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.03□□□□□ -1.69e-11■■■■■ 51.9
PTBP1P26599 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.789e-11■■■■■ 51.9
PTBP1P26599 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.829e-11■■■■■ 51.9
PTBP1P26599 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.839e-11■■■■■ 51.9
PTBP1P26599 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.59■■□□□ 1.373e-7■■■■■ 51.9
PTBP1P26599 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.363e-7■■■■■ 51.9
PTBP1P26599 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.333e-7■■■■■ 51.9
PTBP1P26599 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.19■■□□□ 1.33e-7■■■■■ 51.9
PTBP1P26599 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.243e-7■■■■■ 51.9
PTBP1P26599 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.88■□□□□ 0.933e-7■■■■■ 51.9
PTBP1P26599 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.97■□□□□ 0.473e-7■■■■■ 51.9
PTBP1P26599 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.6□□□□□ -0.553e-7■■■■■ 51.9
PTBP1P26599 RBFOX2-206ENST00000408983 663 ntTSL 35.62□□□□□ -1.513e-16■■■■■ 51.9
PTBP1P26599 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.58■□□□□ 0.088e-13■■■■■ 51.9
PTBP1P26599 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.73□□□□□ -0.218e-13■■■■■ 51.9
PTBP1P26599 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.98□□□□□ -0.175e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-210ENST00000540114 2645 ntTSL 213.55□□□□□ -0.245e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.15□□□□□ -0.465e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.89□□□□□ -0.675e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.07□□□□□ -1.125e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-217ENST00000545381 1191 ntTSL 1 (best)7.54□□□□□ -1.25e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.14□□□□□ -1.275e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.495e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-214ENST00000542187 585 ntTSL 35.75□□□□□ -1.495e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-205ENST00000535575 559 ntTSL 35.19□□□□□ -1.585e-22■■■■■ 51.9
PTBP1P26599 PPFIBP1-208ENST00000538433 609 ntTSL 32.41□□□□□ -2.025e-22■■■■■ 51.9
PTBP1P26599 AC098617.1-202ENST00000428980 1207 ntTSL 5 BASIC6.5□□□□□ -1.372e-12■■■■■ 51.9
PTBP1P26599 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.85□□□□□ -1.471e-9■■■■■ 51.8
PTBP1P26599 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.112e-21■■■■■ 51.8
PTBP1P26599 N4BP1-202ENST00000564124 2485 ntTSL 512.55□□□□□ -0.42e-21■■■■■ 51.8
PTBP1P26599 N4BP1-203ENST00000564710 540 ntTSL 46.58□□□□□ -1.362e-21■■■■■ 51.8
PTBP1P26599 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.186e-9■■■■■ 51.8
PTBP1P26599 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.466e-9■■■■■ 51.8
PTBP1P26599 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.92e-9■■■■■ 51.8
PTBP1P26599 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.059e-7■■■■■ 51.8
PTBP1P26599 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.239e-7■■■■■ 51.8
Retrieved 100 of 27,725 protein–RNA pairs in 312.7 ms