Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 RDN5-3RDN5-3 119 nt6.8□□□□□ -1.32
VPS3P23643 RDN5-4RDN5-4 119 nt6.8□□□□□ -1.32
VPS3P23643 RDN5-5RDN5-5 119 nt6.8□□□□□ -1.32
VPS3P23643 YPL257WYPL257W 582 nt6.8□□□□□ -1.32
VPS3P23643 YNL097W-AYNL097W-A 156 nt6.79□□□□□ -1.32
VPS3P23643 YJR146WYJR146W 354 nt6.78□□□□□ -1.32
VPS3P23643 HMS2YJR147W 1077 nt6.78□□□□□ -1.32
VPS3P23643 IRC11YOR013W 471 nt6.78□□□□□ -1.32
VPS3P23643 STT3YGL022W 2157 nt6.78□□□□□ -1.32
VPS3P23643 COQ3YOL096C 939 nt6.77□□□□□ -1.33
VPS3P23643 OPI11YPR044C 354 nt6.77□□□□□ -1.33
VPS3P23643 TAH11YJR046W 1815 nt6.77□□□□□ -1.33
VPS3P23643 GYP8YFL027C 1494 nt6.77□□□□□ -1.33
VPS3P23643 PTC3YBL056W 1407 nt6.76□□□□□ -1.33
VPS3P23643 ERS1YCR075C 783 nt6.76□□□□□ -1.33
VPS3P23643 MED6YHR058C 888 nt6.76□□□□□ -1.33
VPS3P23643 TPK1YJL164C 1194 nt6.76□□□□□ -1.33
VPS3P23643 DFR1YOR236W 636 nt6.76□□□□□ -1.33
VPS3P23643 HBN1YCL026C-B 582 nt6.76□□□□□ -1.33
VPS3P23643 ARE2YNR019W 1929 nt6.76□□□□□ -1.33
VPS3P23643 tG(GCC)BtG(GCC)B 71 nt6.75□□□□□ -1.33
VPS3P23643 SUF16tG(GCC)C 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)D1tG(GCC)D1 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)D2tG(GCC)D2 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)EtG(GCC)E 71 nt6.75□□□□□ -1.33
VPS3P23643 SUF20tG(GCC)F1 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)F2tG(GCC)F2 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)G1tG(GCC)G1 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)G2tG(GCC)G2 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)J1tG(GCC)J1 71 nt6.75□□□□□ -1.33
VPS3P23643 SUF23tG(GCC)J2 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)MtG(GCC)M 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)O1tG(GCC)O1 71 nt6.75□□□□□ -1.33
VPS3P23643 SUF17tG(GCC)O2 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)P1tG(GCC)P1 71 nt6.75□□□□□ -1.33
VPS3P23643 tG(GCC)P2tG(GCC)P2 71 nt6.75□□□□□ -1.33
VPS3P23643 MIA40YKL195W 1212 nt6.75□□□□□ -1.33
VPS3P23643 SRL2YLR082C 1179 nt6.75□□□□□ -1.33
VPS3P23643 KSH1YNL024C-A 219 nt6.75□□□□□ -1.33
VPS3P23643 DSF1YEL070W 1509 nt6.75□□□□□ -1.33
VPS3P23643 YNR073CYNR073C 1509 nt6.75□□□□□ -1.33
VPS3P23643 YPR196WYPR196W 1413 nt6.75□□□□□ -1.33
VPS3P23643 GSH1YJL101C 2037 nt6.74□□□□□ -1.33
VPS3P23643 VMA2YBR127C 1554 nt6.74□□□□□ -1.33
VPS3P23643 ERG1YGR175C 1491 nt6.74□□□□□ -1.33
VPS3P23643 GFA1YKL104C 2154 nt6.74□□□□□ -1.33
VPS3P23643 HVG1YER039C 750 nt6.74□□□□□ -1.33
VPS3P23643 PRE3YJL001W 648 nt6.74□□□□□ -1.33
VPS3P23643 DID2YKR035W-A 615 nt6.74□□□□□ -1.33
VPS3P23643 MPA43YNL249C 1629 nt6.74□□□□□ -1.33
VPS3P23643 EHD3YDR036C 1503 nt6.74□□□□□ -1.33
VPS3P23643 RGD2YFL047W 2145 nt6.73□□□□□ -1.33
VPS3P23643 YLL066CYLL066C 3618 nt6.73□□□□□ -1.33
VPS3P23643 YLL067CYLL067C 3618 nt6.73□□□□□ -1.33
VPS3P23643 FZF1YGL254W 900 nt6.73□□□□□ -1.33
VPS3P23643 CTF8YHR191C 402 nt6.73□□□□□ -1.33
VPS3P23643 VPS24YKL041W 675 nt6.73□□□□□ -1.33
VPS3P23643 YPL250W-AYPL250W-A 288 nt6.73□□□□□ -1.33
VPS3P23643 YBR241CYBR241C 1467 nt6.73□□□□□ -1.33
VPS3P23643 TIM22YDL217C 624 nt6.72□□□□□ -1.33
VPS3P23643 OGG1YML060W 1131 nt6.72□□□□□ -1.33
VPS3P23643 ATP4YPL078C 735 nt6.72□□□□□ -1.33
VPS3P23643 EDE1YBL047C 4146 nt6.72□□□□□ -1.33
VPS3P23643 FPR2YDR519W 408 nt6.71□□□□□ -1.34
VPS3P23643 YJR084WYJR084W 1272 nt6.71□□□□□ -1.34
VPS3P23643 FPR3YML074C 1236 nt6.71□□□□□ -1.34
VPS3P23643 GTO3YMR251W 1101 nt6.71□□□□□ -1.34
VPS3P23643 TSR3YOR006C 942 nt6.71□□□□□ -1.34
VPS3P23643 RPS28AYOR167C 204 nt6.71□□□□□ -1.34
VPS3P23643 PTC4YBR125C 1182 nt6.71□□□□□ -1.34
VPS3P23643 YGR054WYGR054W 1929 nt6.71□□□□□ -1.34
VPS3P23643 SLA2YNL243W 2907 nt6.71□□□□□ -1.34
VPS3P23643 ARP3YJR065C 1350 nt6.7□□□□□ -1.34
VPS3P23643 GPH1YPR160W 2709 nt6.7□□□□□ -1.34
VPS3P23643 MDE1YJR024C 735 nt6.7□□□□□ -1.34
VPS3P23643 GCN3YKR026C 918 nt6.7□□□□□ -1.34
VPS3P23643 AAT2YLR027C 1257 nt6.7□□□□□ -1.34
VPS3P23643 ZRT2YLR130C 1269 nt6.7□□□□□ -1.34
VPS3P23643 FRE5YOR384W 2085 nt6.7□□□□□ -1.34
VPS3P23643 CCT3YJL014W 1605 nt6.69□□□□□ -1.34
VPS3P23643 RVB2YPL235W 1416 nt6.69□□□□□ -1.34
VPS3P23643 YDL085C-AYDL085C-A 207 nt6.69□□□□□ -1.34
VPS3P23643 ERP2YAL007C 648 nt6.69□□□□□ -1.34
VPS3P23643 SUR7YML052W 909 nt6.69□□□□□ -1.34
VPS3P23643 ADH5YBR145W 1056 nt6.69□□□□□ -1.34
VPS3P23643 ECM31YBR176W 939 nt6.69□□□□□ -1.34
VPS3P23643 LDB16YCL005W 771 nt6.69□□□□□ -1.34
VPS3P23643 PRY3YJL078C 2646 nt6.68□□□□□ -1.34
VPS3P23643 NOG2YNR053C 1461 nt6.68□□□□□ -1.34
VPS3P23643 ECM38YLR299W 1983 nt6.68□□□□□ -1.34
VPS3P23643 MKK1YOR231W 1527 nt6.68□□□□□ -1.34
VPS3P23643 RAD59YDL059C 717 nt6.68□□□□□ -1.34
VPS3P23643 YHL018WYHL018W 363 nt6.68□□□□□ -1.34
VPS3P23643 MIP1YOR330C 3765 nt6.67□□□□□ -1.34
VPS3P23643 GTT3YEL017W 1014 nt6.67□□□□□ -1.34
VPS3P23643 PSR2YLR019W 1194 nt6.67□□□□□ -1.34
VPS3P23643 BDF2YDL070W 1917 nt6.67□□□□□ -1.34
VPS3P23643 NMT1YLR195C 1368 nt6.67□□□□□ -1.34
VPS3P23643 CRF1YDR223W 1404 nt6.67□□□□□ -1.34
VPS3P23643 HEM1YDR232W 1647 nt6.66□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms