Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pde6bP23440 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Pde6bP23440 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pde6bP23440 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pde6bP23440 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pde6bP23440 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pde6bP23440 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pde6bP23440 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Pde6bP23440 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24■■□□□ 1.43
Pde6bP23440 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Pde6bP23440 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pde6bP23440 Rps24-207ENSMUST00000224568 714 ntBASIC23.99■■□□□ 1.43
Pde6bP23440 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pde6bP23440 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pde6bP23440 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.99■■□□□ 1.43
Pde6bP23440 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pde6bP23440 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pde6bP23440 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pde6bP23440 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Pde6bP23440 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Pde6bP23440 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pde6bP23440 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pde6bP23440 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pde6bP23440 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pde6bP23440 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pde6bP23440 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pde6bP23440 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pde6bP23440 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.97■■□□□ 1.43
Pde6bP23440 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pde6bP23440 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pde6bP23440 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.96■■□□□ 1.43
Pde6bP23440 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pde6bP23440 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pde6bP23440 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.96■■□□□ 1.43
Pde6bP23440 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.95■■□□□ 1.42
Pde6bP23440 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.95■■□□□ 1.42
Pde6bP23440 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pde6bP23440 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pde6bP23440 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Pde6bP23440 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pde6bP23440 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pde6bP23440 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pde6bP23440 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Pde6bP23440 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
Pde6bP23440 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pde6bP23440 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Pde6bP23440 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pde6bP23440 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pde6bP23440 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pde6bP23440 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pde6bP23440 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pde6bP23440 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pde6bP23440 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pde6bP23440 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Pde6bP23440 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Pde6bP23440 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.92■■□□□ 1.42
Pde6bP23440 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Pde6bP23440 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pde6bP23440 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Pde6bP23440 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Pde6bP23440 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.9■■□□□ 1.42
Pde6bP23440 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Pde6bP23440 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pde6bP23440 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pde6bP23440 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Pde6bP23440 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pde6bP23440 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.89■■□□□ 1.42
Pde6bP23440 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pde6bP23440 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pde6bP23440 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pde6bP23440 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pde6bP23440 Gm45102-201ENSMUST00000207427 857 ntBASIC23.88■■□□□ 1.41
Pde6bP23440 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.88■■□□□ 1.41
Pde6bP23440 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pde6bP23440 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pde6bP23440 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.87■■□□□ 1.41
Pde6bP23440 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
Pde6bP23440 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pde6bP23440 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pde6bP23440 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pde6bP23440 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.86■■□□□ 1.41
Pde6bP23440 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pde6bP23440 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pde6bP23440 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pde6bP23440 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pde6bP23440 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.85■■□□□ 1.41
Pde6bP23440 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pde6bP23440 Gm15039-201ENSMUST00000118914 875 ntBASIC23.85■■□□□ 1.41
Pde6bP23440 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pde6bP23440 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pde6bP23440 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pde6bP23440 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pde6bP23440 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pde6bP23440 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pde6bP23440 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pde6bP23440 Gm14117-201ENSMUST00000122417 843 ntBASIC23.83■■□□□ 1.41
Pde6bP23440 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pde6bP23440 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pde6bP23440 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pde6bP23440 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms