Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3BP20337 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3BP20337 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3BP20337 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3BP20337 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RAB3BP20337 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3BP20337 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3BP20337 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.22■□□□□ 0.99
RAB3BP20337 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3BP20337 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.22■□□□□ 0.99
RAB3BP20337 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3BP20337 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3BP20337 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB3BP20337 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAB3BP20337 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAB3BP20337 AC110285.7-201ENST00000624417 1536 ntBASIC21.21■□□□□ 0.99
RAB3BP20337 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB3BP20337 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.21■□□□□ 0.99
RAB3BP20337 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3BP20337 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3BP20337 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAB3BP20337 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3BP20337 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RAB3BP20337 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RAB3BP20337 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB3BP20337 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3BP20337 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3BP20337 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3BP20337 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB3BP20337 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3BP20337 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB3BP20337 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RAB3BP20337 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB3BP20337 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3BP20337 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.19■□□□□ 0.98
RAB3BP20337 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB3BP20337 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3BP20337 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3BP20337 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.19■□□□□ 0.98
RAB3BP20337 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB3BP20337 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3BP20337 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3BP20337 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3BP20337 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3BP20337 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RAB3BP20337 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3BP20337 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.17■□□□□ 0.98
RAB3BP20337 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3BP20337 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3BP20337 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3BP20337 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RAB3BP20337 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3BP20337 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3BP20337 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB3BP20337 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3BP20337 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RAB3BP20337 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB3BP20337 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3BP20337 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3BP20337 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB3BP20337 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3BP20337 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3BP20337 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3BP20337 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.15■□□□□ 0.98
RAB3BP20337 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.14■□□□□ 0.97
RAB3BP20337 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3BP20337 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.14■□□□□ 0.97
RAB3BP20337 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3BP20337 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3BP20337 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3BP20337 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3BP20337 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.13■□□□□ 0.97
RAB3BP20337 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3BP20337 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RAB3BP20337 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3BP20337 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3BP20337 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3BP20337 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB3BP20337 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3BP20337 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB3BP20337 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3BP20337 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB3BP20337 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3BP20337 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB3BP20337 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3BP20337 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3BP20337 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3BP20337 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB3BP20337 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3BP20337 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3BP20337 SUZ12P1-203ENST00000578195 985 ntBASIC21.11■□□□□ 0.97
RAB3BP20337 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.11■□□□□ 0.97
RAB3BP20337 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3BP20337 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB3BP20337 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RAB3BP20337 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB3BP20337 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB3BP20337 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3BP20337 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3BP20337 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms