Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACANP16112 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ACANP16112 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.42■□□□□ 0.86
ACANP16112 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACANP16112 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.42■□□□□ 0.86
ACANP16112 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACANP16112 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
ACANP16112 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACANP16112 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACANP16112 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ACANP16112 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACANP16112 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ACANP16112 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACANP16112 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.4■□□□□ 0.86
ACANP16112 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.4■□□□□ 0.86
ACANP16112 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.4■□□□□ 0.86
ACANP16112 RARRES2P6-201ENST00000567333 442 ntBASIC20.4■□□□□ 0.86
ACANP16112 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACANP16112 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ACANP16112 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.39■□□□□ 0.85
ACANP16112 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACANP16112 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACANP16112 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.38■□□□□ 0.85
ACANP16112 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACANP16112 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ACANP16112 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.38■□□□□ 0.85
ACANP16112 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.38■□□□□ 0.85
ACANP16112 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.38■□□□□ 0.85
ACANP16112 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.38■□□□□ 0.85
ACANP16112 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACANP16112 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ACANP16112 AC022616.5-201ENST00000518796 181 ntBASIC20.37■□□□□ 0.85
ACANP16112 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.37■□□□□ 0.85
ACANP16112 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ACANP16112 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.37■□□□□ 0.85
ACANP16112 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.37■□□□□ 0.85
ACANP16112 RPS2P7-201ENST00000447334 885 ntBASIC20.36■□□□□ 0.85
ACANP16112 MIR4466-201ENST00000606121 54 ntBASIC20.36■□□□□ 0.85
ACANP16112 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACANP16112 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACANP16112 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACANP16112 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACANP16112 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.35■□□□□ 0.85
ACANP16112 MIR3621-201ENST00000580529 85 ntBASIC20.35■□□□□ 0.85
ACANP16112 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.35■□□□□ 0.85
ACANP16112 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.35■□□□□ 0.85
ACANP16112 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACANP16112 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.35■□□□□ 0.85
ACANP16112 AL136116.3-201ENST00000402907 1138 ntBASIC20.34■□□□□ 0.85
ACANP16112 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ACANP16112 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACANP16112 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACANP16112 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACANP16112 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.33■□□□□ 0.85
ACANP16112 AC096631.2-201ENST00000436136 790 ntBASIC20.33■□□□□ 0.85
ACANP16112 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.33■□□□□ 0.85
ACANP16112 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ACANP16112 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ACANP16112 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ACANP16112 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ACANP16112 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ACANP16112 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ACANP16112 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACANP16112 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ACANP16112 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.32■□□□□ 0.84
ACANP16112 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.32■□□□□ 0.84
ACANP16112 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACANP16112 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACANP16112 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACANP16112 AC133561.4-201ENST00000566112 224 ntBASIC20.32■□□□□ 0.84
ACANP16112 AC104564.3-201ENST00000582367 638 ntBASIC20.32■□□□□ 0.84
ACANP16112 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.32■□□□□ 0.84
ACANP16112 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACANP16112 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
ACANP16112 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACANP16112 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.31■□□□□ 0.84
ACANP16112 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ACANP16112 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACANP16112 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACANP16112 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACANP16112 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.3■□□□□ 0.84
ACANP16112 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.3■□□□□ 0.84
ACANP16112 SUDS3P1-201ENST00000505831 966 ntBASIC20.3■□□□□ 0.84
ACANP16112 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACANP16112 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACANP16112 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACANP16112 TSPY9P-201ENST00000440215 945 ntBASIC20.29■□□□□ 0.84
ACANP16112 TSPY11P-201ENST00000442607 1045 ntBASIC20.29■□□□□ 0.84
ACANP16112 AC092028.1-203ENST00000608262 953 ntBASIC20.29■□□□□ 0.84
ACANP16112 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACANP16112 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ACANP16112 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACANP16112 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.28■□□□□ 0.84
ACANP16112 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACANP16112 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.27■□□□□ 0.84
ACANP16112 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACANP16112 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ACANP16112 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
ACANP16112 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACANP16112 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 627.6 ms