Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl3P10855 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl3P10855 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl3P10855 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl3P10855 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ccl3P10855 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccl3P10855 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccl3P10855 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl3P10855 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl3P10855 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl3P10855 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccl3P10855 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccl3P10855 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccl3P10855 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl3P10855 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl3P10855 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl3P10855 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Etf1-202ENSMUST00000180351 108 ntBASIC19.81■□□□□ 0.76
Ccl3P10855 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccl3P10855 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl3P10855 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl3P10855 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl3P10855 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ccl3P10855 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccl3P10855 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccl3P10855 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Ccl3P10855 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccl3P10855 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccl3P10855 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccl3P10855 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl3P10855 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl3P10855 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl3P10855 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccl3P10855 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccl3P10855 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccl3P10855 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccl3P10855 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccl3P10855 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccl3P10855 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl3P10855 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl3P10855 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccl3P10855 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccl3P10855 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl3P10855 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl3P10855 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Ccl3P10855 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccl3P10855 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccl3P10855 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl3P10855 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.73■□□□□ 0.75
Ccl3P10855 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl3P10855 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl3P10855 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ccl3P10855 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.72■□□□□ 0.75
Ccl3P10855 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccl3P10855 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl3P10855 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccl3P10855 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccl3P10855 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
Ccl3P10855 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Ccl3P10855 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl3P10855 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl3P10855 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccl3P10855 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.7■□□□□ 0.74
Ccl3P10855 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccl3P10855 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.7■□□□□ 0.74
Ccl3P10855 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccl3P10855 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccl3P10855 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccl3P10855 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccl3P10855 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccl3P10855 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl3P10855 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms