Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 YKL169CYKL169C 384 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 YBL036CYBL036C 774 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 YMR178WYMR178W 825 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 YOL035CYOL035C 303 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 YPL068CYPL068C 882 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 IFA38YBR159W 1044 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 TED1YIL039W 1422 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 RSC9YML127W 1746 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 YDL121CYDL121C 450 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 PPH22YDL188C 1134 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 ARO3YDR035W 1113 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 RPL12BYDR418W 498 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 YDR541CYDR541C 1035 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 YLR118CYLR118C 684 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 VPS20YMR077C 666 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 RRP15YPR143W 753 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 CMR1YDL156W 1569 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 INO1YJL153C 1602 nt6.76□□□□□ -1.33
TY1A-LR2P0CX72 YDR094WYDR094W 336 nt6.75□□□□□ -1.33
TY1A-LR2P0CX72 CAB5YDR196C 726 nt6.75□□□□□ -1.33
TY1A-LR2P0CX72 DPH5YLR172C 903 nt6.75□□□□□ -1.33
TY1A-LR2P0CX72 YMR226CYMR226C 804 nt6.75□□□□□ -1.33
TY1A-LR2P0CX72 AAH1YNL141W 1044 nt6.75□□□□□ -1.33
TY1A-LR2P0CX72 ARL3YPL051W 597 nt6.75□□□□□ -1.33
TY1A-LR2P0CX72 YPL222C-AYPL222C-A 246 nt6.75□□□□□ -1.33
TY1A-LR2P0CX72 RGT2YDL138W 2292 nt6.75□□□□□ -1.33
TY1A-LR2P0CX72 TPO1YLL028W 1761 nt6.74□□□□□ -1.33
TY1A-LR2P0CX72 TGL5YOR081C 2250 nt6.74□□□□□ -1.33
TY1A-LR2P0CX72 BIM1YER016W 1035 nt6.74□□□□□ -1.33
TY1A-LR2P0CX72 SNA3YJL151C 402 nt6.74□□□□□ -1.33
TY1A-LR2P0CX72 PAU16YKL224C 372 nt6.74□□□□□ -1.33
TY1A-LR2P0CX72 RMD8YFR048W 1989 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 IMP3YHR148W 552 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 CTR2YHR175W 570 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 NVJ1YHR195W 966 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 MTR2YKL186C 555 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 RUF5-1RUF5-1 710 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 RUF5-2RUF5-2 710 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 YOR062CYOR062C 807 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 YPR109WYPR109W 885 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 PTC6YCR079W 1329 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 YOR389WYOR389W 1875 nt6.73□□□□□ -1.33
TY1A-LR2P0CX72 PFA5YDR459C 1125 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 YJL171CYJL171C 1191 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 YLR365WYLR365W 333 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 MRPL4YLR439W 960 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 CSM3YMR048W 954 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 YNL174WYNL174W 573 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 IES2YNL215W 963 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 TOD6YBL054W 1578 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 CLP1YOR250C 1338 nt6.72□□□□□ -1.33
TY1A-LR2P0CX72 KAR5YMR065W 1515 nt6.71□□□□□ -1.33
TY1A-LR2P0CX72 SHE9YDR393W 1371 nt6.71□□□□□ -1.33
TY1A-LR2P0CX72 RUP1YOR138C 2016 nt6.71□□□□□ -1.33
TY1A-LR2P0CX72 VPS72YDR485C 2388 nt6.71□□□□□ -1.34
TY1A-LR2P0CX72 YDR249CYDR249C 1122 nt6.71□□□□□ -1.34
TY1A-LR2P0CX72 YJL009WYJL009W 327 nt6.71□□□□□ -1.34
TY1A-LR2P0CX72 ELF1YKL160W 438 nt6.71□□□□□ -1.34
TY1A-LR2P0CX72 ATP4YPL078C 735 nt6.71□□□□□ -1.34
TY1A-LR2P0CX72 RIB7YBR153W 735 nt6.71□□□□□ -1.34
TY1A-LR2P0CX72 AIM17YHL021C 1398 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 KTR4YBR199W 1395 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 PEX28YHR150W 1740 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 HMLALPHA1YCL066W 528 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 MATALPHA1YCR040W 528 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 YDR029WYDR029W 315 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 VRG4YGL225W 1014 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 NMA2YGR010W 1188 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 KSS1YGR040W 1107 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 CLC1YGR167W 702 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 ERG20YJL167W 1059 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 SPC34YKR037C 888 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 ORM2YLR350W 651 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 YMR119W-AYMR119W-A 375 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 CSL4YNL232W 879 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 DIP5YPL265W 1827 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 MAL31YBR298C 1845 nt6.7□□□□□ -1.34
TY1A-LR2P0CX72 SSC1YJR045C 1965 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 GAS1YMR307W 1680 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 EDC2YER035W 438 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 LAC1YKL008C 1257 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 YLR307C-AYLR307C-A 264 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 URA4YLR420W 1095 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 SLZ1YNL196C 897 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 YIF1YNL263C 945 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 RRI1YDL216C 1323 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 YEL023CYEL023C 2049 nt6.69□□□□□ -1.34
TY1A-LR2P0CX72 YDL114WYDL114W 927 nt6.68□□□□□ -1.34
TY1A-LR2P0CX72 RRG1YDR065W 1098 nt6.68□□□□□ -1.34
TY1A-LR2P0CX72 ADK2YER170W 678 nt6.68□□□□□ -1.34
TY1A-LR2P0CX72 NCS6YGL211W 1080 nt6.68□□□□□ -1.34
TY1A-LR2P0CX72 YJL215CYJL215C 360 nt6.68□□□□□ -1.34
TY1A-LR2P0CX72 YJU2YKL095W 837 nt6.68□□□□□ -1.34
TY1A-LR2P0CX72 YBL113CYBL113C 2379 nt6.67□□□□□ -1.34
TY1A-LR2P0CX72 YLR345WYLR345W 1530 nt6.67□□□□□ -1.34
TY1A-LR2P0CX72 AMF1YOR378W 1548 nt6.67□□□□□ -1.34
TY1A-LR2P0CX72 PEX19YDL065C 1029 nt6.67□□□□□ -1.34
TY1A-LR2P0CX72 YGR068W-AYGR068W-A 96 nt6.67□□□□□ -1.34
TY1A-LR2P0CX72 SKI6YGR195W 741 nt6.67□□□□□ -1.34
TY1A-LR2P0CX72 PAN5YHR063C 1140 nt6.67□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 77.9 ms