Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sod1P08228 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.28■■□□□ 1
Sod1P08228 Gm9959-201ENSMUST00000068277 390 ntBASIC21.28■■□□□ 1
Sod1P08228 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sod1P08228 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Sod1P08228 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sod1P08228 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.27■■□□□ 1
Sod1P08228 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sod1P08228 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sod1P08228 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sod1P08228 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Sod1P08228 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sod1P08228 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sod1P08228 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sod1P08228 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Sod1P08228 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sod1P08228 Gm15039-201ENSMUST00000118914 875 ntBASIC21.25■□□□□ 0.99
Sod1P08228 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sod1P08228 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sod1P08228 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sod1P08228 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sod1P08228 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sod1P08228 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sod1P08228 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.24■□□□□ 0.99
Sod1P08228 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sod1P08228 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sod1P08228 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sod1P08228 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.23■□□□□ 0.99
Sod1P08228 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sod1P08228 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sod1P08228 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sod1P08228 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sod1P08228 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sod1P08228 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Sod1P08228 Gm10232-201ENSMUST00000089221 720 ntBASIC21.21■□□□□ 0.99
Sod1P08228 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sod1P08228 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.21■□□□□ 0.99
Sod1P08228 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sod1P08228 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sod1P08228 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sod1P08228 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sod1P08228 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sod1P08228 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sod1P08228 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Sod1P08228 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sod1P08228 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sod1P08228 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sod1P08228 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sod1P08228 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.18■□□□□ 0.98
Sod1P08228 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sod1P08228 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sod1P08228 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sod1P08228 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Sod1P08228 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sod1P08228 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sod1P08228 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sod1P08228 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sod1P08228 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sod1P08228 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sod1P08228 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sod1P08228 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sod1P08228 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sod1P08228 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sod1P08228 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sod1P08228 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Sod1P08228 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sod1P08228 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sod1P08228 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.14■□□□□ 0.97
Sod1P08228 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.14■□□□□ 0.97
Sod1P08228 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Sod1P08228 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sod1P08228 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.13■□□□□ 0.97
Sod1P08228 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Sod1P08228 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sod1P08228 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sod1P08228 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sod1P08228 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sod1P08228 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sod1P08228 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sod1P08228 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sod1P08228 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sod1P08228 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sod1P08228 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sod1P08228 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sod1P08228 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sod1P08228 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Sod1P08228 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sod1P08228 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Sod1P08228 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sod1P08228 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sod1P08228 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sod1P08228 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sod1P08228 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.08■□□□□ 0.97
Sod1P08228 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sod1P08228 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.08■□□□□ 0.97
Sod1P08228 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sod1P08228 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sod1P08228 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Sod1P08228 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sod1P08228 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms