Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC092803.2-201ENST00000564287 1899 ntBASIC20.92■□□□□ 0.94
SFTPBP07988 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SFTPBP07988 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SFTPBP07988 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SFTPBP07988 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SFTPBP07988 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.91■□□□□ 0.94
SFTPBP07988 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SFTPBP07988 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SFTPBP07988 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.91■□□□□ 0.94
SFTPBP07988 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SFTPBP07988 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SFTPBP07988 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SFTPBP07988 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SFTPBP07988 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
SFTPBP07988 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.9■□□□□ 0.94
SFTPBP07988 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.89■□□□□ 0.94
SFTPBP07988 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SFTPBP07988 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
SFTPBP07988 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SFTPBP07988 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SFTPBP07988 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.89■□□□□ 0.93
SFTPBP07988 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SFTPBP07988 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFTPBP07988 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFTPBP07988 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SFTPBP07988 AC008813.1-201ENST00000536597 885 ntBASIC20.88■□□□□ 0.93
SFTPBP07988 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SFTPBP07988 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFTPBP07988 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SFTPBP07988 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.87■□□□□ 0.93
SFTPBP07988 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.87■□□□□ 0.93
SFTPBP07988 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.87■□□□□ 0.93
SFTPBP07988 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFTPBP07988 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.87■□□□□ 0.93
SFTPBP07988 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.86■□□□□ 0.93
SFTPBP07988 MIR219A2-201ENST00000608502 1504 ntBASIC20.86■□□□□ 0.93
SFTPBP07988 DUSP8P4-201ENST00000399538 1761 ntBASIC20.86■□□□□ 0.93
SFTPBP07988 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SFTPBP07988 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SFTPBP07988 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFTPBP07988 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.85■□□□□ 0.93
SFTPBP07988 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFTPBP07988 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFTPBP07988 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFTPBP07988 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SFTPBP07988 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SFTPBP07988 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SFTPBP07988 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.84■□□□□ 0.93
SFTPBP07988 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SFTPBP07988 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.83■□□□□ 0.93
SFTPBP07988 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SFTPBP07988 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SFTPBP07988 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SFTPBP07988 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
SFTPBP07988 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
SFTPBP07988 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.83■□□□□ 0.93
SFTPBP07988 AC148477.6-201ENST00000623746 465 ntBASIC20.83■□□□□ 0.93
SFTPBP07988 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SFTPBP07988 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SFTPBP07988 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SFTPBP07988 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SFTPBP07988 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SFTPBP07988 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SFTPBP07988 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
SFTPBP07988 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SFTPBP07988 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.83■□□□□ 0.92
SFTPBP07988 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SFTPBP07988 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SFTPBP07988 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SFTPBP07988 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.82■□□□□ 0.92
SFTPBP07988 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SFTPBP07988 HSD17B1P1-201ENST00000590052 955 ntBASIC20.82■□□□□ 0.92
SFTPBP07988 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SFTPBP07988 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.82■□□□□ 0.92
SFTPBP07988 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SFTPBP07988 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SFTPBP07988 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SFTPBP07988 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.82■□□□□ 0.92
SFTPBP07988 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms