Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.3■■□□□ 1.32
PrnpP04925 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.3■■□□□ 1.32
PrnpP04925 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PrnpP04925 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PrnpP04925 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.3■■□□□ 1.32
PrnpP04925 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PrnpP04925 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PrnpP04925 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PrnpP04925 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PrnpP04925 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PrnpP04925 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PrnpP04925 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PrnpP04925 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PrnpP04925 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PrnpP04925 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PrnpP04925 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PrnpP04925 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PrnpP04925 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PrnpP04925 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.28■■□□□ 1.32
PrnpP04925 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PrnpP04925 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PrnpP04925 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PrnpP04925 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PrnpP04925 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PrnpP04925 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PrnpP04925 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.27■■□□□ 1.32
PrnpP04925 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PrnpP04925 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PrnpP04925 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PrnpP04925 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PrnpP04925 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PrnpP04925 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PrnpP04925 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PrnpP04925 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.25■■□□□ 1.31
PrnpP04925 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PrnpP04925 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PrnpP04925 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
PrnpP04925 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PrnpP04925 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PrnpP04925 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PrnpP04925 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PrnpP04925 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.22■■□□□ 1.31
PrnpP04925 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PrnpP04925 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
PrnpP04925 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PrnpP04925 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PrnpP04925 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PrnpP04925 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PrnpP04925 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PrnpP04925 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
PrnpP04925 Etf1-202ENSMUST00000180351 108 ntBASIC23.19■■□□□ 1.3
PrnpP04925 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PrnpP04925 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PrnpP04925 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PrnpP04925 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PrnpP04925 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PrnpP04925 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PrnpP04925 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.16■■□□□ 1.3
PrnpP04925 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PrnpP04925 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.16■■□□□ 1.3
PrnpP04925 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PrnpP04925 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PrnpP04925 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PrnpP04925 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PrnpP04925 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PrnpP04925 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PrnpP04925 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PrnpP04925 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.14■■□□□ 1.29
PrnpP04925 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PrnpP04925 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PrnpP04925 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PrnpP04925 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PrnpP04925 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PrnpP04925 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PrnpP04925 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PrnpP04925 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PrnpP04925 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PrnpP04925 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PrnpP04925 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PrnpP04925 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PrnpP04925 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PrnpP04925 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PrnpP04925 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.11■■□□□ 1.29
PrnpP04925 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.11■■□□□ 1.29
PrnpP04925 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
PrnpP04925 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PrnpP04925 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PrnpP04925 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PrnpP04925 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PrnpP04925 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
PrnpP04925 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PrnpP04925 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PrnpP04925 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PrnpP04925 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PrnpP04925 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.08■■□□□ 1.29
PrnpP04925 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.08■■□□□ 1.29
PrnpP04925 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PrnpP04925 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PrnpP04925 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PrnpP04925 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 145.7 ms