Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd74P04441 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd74P04441 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cd74P04441 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd74P04441 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd74P04441 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd74P04441 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd74P04441 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd74P04441 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd74P04441 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd74P04441 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd74P04441 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd74P04441 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd74P04441 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd74P04441 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cd74P04441 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd74P04441 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.38■□□□□ 0.53
Cd74P04441 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd74P04441 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd74P04441 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.38■□□□□ 0.53
Cd74P04441 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.37■□□□□ 0.53
Cd74P04441 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd74P04441 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cd74P04441 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd74P04441 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cd74P04441 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd74P04441 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd74P04441 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cd74P04441 Gm7332-201ENSMUST00000118351 454 ntBASIC18.34■□□□□ 0.53
Cd74P04441 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd74P04441 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd74P04441 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd74P04441 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cd74P04441 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd74P04441 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Cd74P04441 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cd74P04441 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd74P04441 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cd74P04441 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd74P04441 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.33■□□□□ 0.52
Cd74P04441 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd74P04441 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd74P04441 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd74P04441 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd74P04441 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd74P04441 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.32■□□□□ 0.52
Cd74P04441 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cd74P04441 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd74P04441 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd74P04441 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd74P04441 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd74P04441 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.32■□□□□ 0.52
Cd74P04441 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd74P04441 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd74P04441 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd74P04441 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd74P04441 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd74P04441 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Cd74P04441 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd74P04441 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd74P04441 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd74P04441 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd74P04441 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd74P04441 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cd74P04441 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd74P04441 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Cd74P04441 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd74P04441 Terc-201ENSMUST00000082862 423 ntBASIC18.3■□□□□ 0.52
Cd74P04441 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd74P04441 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd74P04441 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd74P04441 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd74P04441 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cd74P04441 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Cd74P04441 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd74P04441 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.29■□□□□ 0.52
Cd74P04441 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd74P04441 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cd74P04441 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd74P04441 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd74P04441 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cd74P04441 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cd74P04441 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms