Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.27■□□□□ 0.84
GAPDHP04406 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GAPDHP04406 AC092803.2-201ENST00000564287 1899 ntBASIC20.26■□□□□ 0.83
GAPDHP04406 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GAPDHP04406 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GAPDHP04406 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GAPDHP04406 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GAPDHP04406 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GAPDHP04406 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GAPDHP04406 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GAPDHP04406 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
GAPDHP04406 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
GAPDHP04406 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GAPDHP04406 AC148477.6-201ENST00000623746 465 ntBASIC20.24■□□□□ 0.83
GAPDHP04406 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GAPDHP04406 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
GAPDHP04406 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
GAPDHP04406 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GAPDHP04406 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.23■□□□□ 0.83
GAPDHP04406 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GAPDHP04406 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.23■□□□□ 0.83
GAPDHP04406 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.23■□□□□ 0.83
GAPDHP04406 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GAPDHP04406 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
GAPDHP04406 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GAPDHP04406 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAPDHP04406 HLA-V-202ENST00000446817 847 ntBASIC20.22■□□□□ 0.83
GAPDHP04406 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAPDHP04406 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAPDHP04406 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAPDHP04406 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.21■□□□□ 0.83
GAPDHP04406 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.21■□□□□ 0.83
GAPDHP04406 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GAPDHP04406 MIR219A2-201ENST00000608502 1504 ntBASIC20.21■□□□□ 0.83
GAPDHP04406 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GAPDHP04406 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.2■□□□□ 0.82
GAPDHP04406 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GAPDHP04406 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
GAPDHP04406 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GAPDHP04406 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.19■□□□□ 0.82
GAPDHP04406 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
GAPDHP04406 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
GAPDHP04406 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAPDHP04406 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GAPDHP04406 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
GAPDHP04406 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GAPDHP04406 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAPDHP04406 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAPDHP04406 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GAPDHP04406 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.18■□□□□ 0.82
GAPDHP04406 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAPDHP04406 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GAPDHP04406 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAPDHP04406 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GAPDHP04406 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
GAPDHP04406 MIR639-201ENST00000384974 98 ntBASIC20.17■□□□□ 0.82
GAPDHP04406 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.17■□□□□ 0.82
GAPDHP04406 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.17■□□□□ 0.82
GAPDHP04406 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAPDHP04406 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GAPDHP04406 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAPDHP04406 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GAPDHP04406 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAPDHP04406 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GAPDHP04406 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.16■□□□□ 0.82
GAPDHP04406 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAPDHP04406 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
GAPDHP04406 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAPDHP04406 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAPDHP04406 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.15■□□□□ 0.82
GAPDHP04406 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GAPDHP04406 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.15■□□□□ 0.82
GAPDHP04406 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAPDHP04406 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAPDHP04406 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
GAPDHP04406 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.15■□□□□ 0.82
GAPDHP04406 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.15■□□□□ 0.82
GAPDHP04406 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GAPDHP04406 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAPDHP04406 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
GAPDHP04406 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.14■□□□□ 0.81
GAPDHP04406 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.14■□□□□ 0.81
GAPDHP04406 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.14■□□□□ 0.81
GAPDHP04406 WHAMMP3-201ENST00000611636 1609 ntBASIC20.14■□□□□ 0.81
GAPDHP04406 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GAPDHP04406 ERN1-208ENST00000606895 2068 ntBASIC20.14■□□□□ 0.81
GAPDHP04406 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAPDHP04406 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.13■□□□□ 0.81
GAPDHP04406 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GAPDHP04406 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GAPDHP04406 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
GAPDHP04406 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GAPDHP04406 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAPDHP04406 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.13■□□□□ 0.81
GAPDHP04406 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAPDHP04406 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAPDHP04406 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAPDHP04406 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAPDHP04406 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAPDHP04406 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms