Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.7■□□□□ 0.1
Hbb-b1P02088 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hbb-b1P02088 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hbb-b1P02088 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hbb-b1P02088 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.69■□□□□ 0.1
Hbb-b1P02088 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hbb-b1P02088 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hbb-b1P02088 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hbb-b1P02088 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hbb-b1P02088 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hbb-b1P02088 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hbb-b1P02088 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hbb-b1P02088 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hbb-b1P02088 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hbb-b1P02088 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hbb-b1P02088 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hbb-b1P02088 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Hbb-b1P02088 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hbb-b1P02088 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hbb-b1P02088 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hbb-b1P02088 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hbb-b1P02088 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hbb-b1P02088 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hbb-b1P02088 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hbb-b1P02088 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hbb-b1P02088 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hbb-b1P02088 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hbb-b1P02088 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hbb-b1P02088 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hbb-b1P02088 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hbb-b1P02088 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hbb-b1P02088 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hbb-b1P02088 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hbb-b1P02088 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.64■□□□□ 0.09
Hbb-b1P02088 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hbb-b1P02088 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hbb-b1P02088 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hbb-b1P02088 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hbb-b1P02088 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hbb-b1P02088 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hbb-b1P02088 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.61■□□□□ 0.09
Hbb-b1P02088 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hbb-b1P02088 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Hbb-b1P02088 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hbb-b1P02088 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hbb-b1P02088 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Hbb-b1P02088 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hbb-b1P02088 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hbb-b1P02088 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hbb-b1P02088 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hbb-b1P02088 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hbb-b1P02088 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hbb-b1P02088 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hbb-b1P02088 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hbb-b1P02088 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hbb-b1P02088 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hbb-b1P02088 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hbb-b1P02088 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Hbb-b1P02088 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hbb-b1P02088 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hbb-b1P02088 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hbb-b1P02088 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hbb-b1P02088 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.58■□□□□ 0.08
Hbb-b1P02088 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hbb-b1P02088 Peli2-204ENSMUST00000226513 1320 ntBASIC15.58■□□□□ 0.08
Hbb-b1P02088 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hbb-b1P02088 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.58■□□□□ 0.08
Hbb-b1P02088 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Hbb-b1P02088 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Hbb-b1P02088 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms