Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cldn1O88551 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn1O88551 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn1O88551 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn1O88551 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cldn1O88551 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn1O88551 Etf1-202ENSMUST00000180351 108 ntBASIC18.88■□□□□ 0.61
Cldn1O88551 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn1O88551 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn1O88551 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn1O88551 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn1O88551 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
Cldn1O88551 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn1O88551 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn1O88551 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn1O88551 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn1O88551 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn1O88551 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.86■□□□□ 0.61
Cldn1O88551 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn1O88551 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn1O88551 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn1O88551 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.85■□□□□ 0.61
Cldn1O88551 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cldn1O88551 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn1O88551 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.85■□□□□ 0.61
Cldn1O88551 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.85■□□□□ 0.61
Cldn1O88551 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cldn1O88551 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn1O88551 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn1O88551 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn1O88551 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn1O88551 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn1O88551 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.83■□□□□ 0.6
Cldn1O88551 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn1O88551 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.83■□□□□ 0.6
Cldn1O88551 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn1O88551 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cldn1O88551 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.83■□□□□ 0.6
Cldn1O88551 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn1O88551 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn1O88551 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.83■□□□□ 0.6
Cldn1O88551 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn1O88551 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn1O88551 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn1O88551 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn1O88551 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn1O88551 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn1O88551 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn1O88551 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.81■□□□□ 0.6
Cldn1O88551 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn1O88551 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cldn1O88551 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn1O88551 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn1O88551 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn1O88551 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn1O88551 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.8■□□□□ 0.6
Cldn1O88551 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cldn1O88551 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn1O88551 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cldn1O88551 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn1O88551 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn1O88551 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn1O88551 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn1O88551 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cldn1O88551 Gm10232-201ENSMUST00000089221 720 ntBASIC18.79■□□□□ 0.6
Cldn1O88551 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cldn1O88551 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn1O88551 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cldn1O88551 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Cldn1O88551 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn1O88551 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.78■□□□□ 0.6
Cldn1O88551 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn1O88551 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn1O88551 Serp2-204ENSMUST00000228055 705 ntBASIC18.78■□□□□ 0.6
Cldn1O88551 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cldn1O88551 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn1O88551 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.77■□□□□ 0.6
Cldn1O88551 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn1O88551 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn1O88551 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn1O88551 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn1O88551 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.77■□□□□ 0.6
Cldn1O88551 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn1O88551 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn1O88551 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn1O88551 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn1O88551 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn1O88551 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn1O88551 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn1O88551 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.75■□□□□ 0.59
Cldn1O88551 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn1O88551 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn1O88551 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn1O88551 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn1O88551 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn1O88551 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.74■□□□□ 0.59
Cldn1O88551 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.74■□□□□ 0.59
Cldn1O88551 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn1O88551 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn1O88551 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms