Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cops4O88544 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cops4O88544 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Cops4O88544 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.35■□□□□ 0.85
Cops4O88544 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops4O88544 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops4O88544 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cops4O88544 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cops4O88544 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops4O88544 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cops4O88544 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Cops4O88544 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops4O88544 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops4O88544 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cops4O88544 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cops4O88544 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cops4O88544 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.32■□□□□ 0.84
Cops4O88544 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cops4O88544 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops4O88544 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.32■□□□□ 0.84
Cops4O88544 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cops4O88544 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops4O88544 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Cops4O88544 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cops4O88544 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cops4O88544 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.31■□□□□ 0.84
Cops4O88544 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cops4O88544 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cops4O88544 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.31■□□□□ 0.84
Cops4O88544 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.31■□□□□ 0.84
Cops4O88544 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cops4O88544 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cops4O88544 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.31■□□□□ 0.84
Cops4O88544 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cops4O88544 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cops4O88544 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.29■□□□□ 0.84
Cops4O88544 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Cops4O88544 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.29■□□□□ 0.84
Cops4O88544 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cops4O88544 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops4O88544 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops4O88544 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops4O88544 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cops4O88544 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cops4O88544 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cops4O88544 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cops4O88544 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cops4O88544 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cops4O88544 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cops4O88544 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cops4O88544 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cops4O88544 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.26■□□□□ 0.83
Cops4O88544 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops4O88544 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops4O88544 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops4O88544 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.25■□□□□ 0.83
Cops4O88544 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.25■□□□□ 0.83
Cops4O88544 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.24■□□□□ 0.83
Cops4O88544 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops4O88544 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops4O88544 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.24■□□□□ 0.83
Cops4O88544 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cops4O88544 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cops4O88544 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops4O88544 Gm6821-201ENSMUST00000107540 542 ntBASIC20.23■□□□□ 0.83
Cops4O88544 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.23■□□□□ 0.83
Cops4O88544 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.23■□□□□ 0.83
Cops4O88544 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Cops4O88544 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops4O88544 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops4O88544 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops4O88544 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cops4O88544 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cops4O88544 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.22■□□□□ 0.83
Cops4O88544 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cops4O88544 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops4O88544 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops4O88544 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cops4O88544 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Cops4O88544 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.21■□□□□ 0.83
Cops4O88544 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cops4O88544 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cops4O88544 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops4O88544 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops4O88544 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops4O88544 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
Cops4O88544 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops4O88544 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops4O88544 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.19■□□□□ 0.82
Cops4O88544 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops4O88544 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops4O88544 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cops4O88544 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops4O88544 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops4O88544 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cops4O88544 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops4O88544 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cops4O88544 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.18■□□□□ 0.82
Cops4O88544 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops4O88544 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 334.9 ms