Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10226O88253 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10226O88253 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10226O88253 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Gm10226O88253 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gm10226O88253 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10226O88253 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10226O88253 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.19■□□□□ 0.34
Gm10226O88253 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gm10226O88253 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10226O88253 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10226O88253 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm10226O88253 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10226O88253 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10226O88253 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10226O88253 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10226O88253 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10226O88253 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10226O88253 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10226O88253 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gm10226O88253 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10226O88253 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10226O88253 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10226O88253 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10226O88253 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Gm10226O88253 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.16■□□□□ 0.34
Gm10226O88253 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10226O88253 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm10226O88253 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10226O88253 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10226O88253 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm10226O88253 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10226O88253 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10226O88253 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10226O88253 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10226O88253 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10226O88253 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10226O88253 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10226O88253 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10226O88253 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.14■□□□□ 0.33
Gm10226O88253 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10226O88253 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm10226O88253 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm10226O88253 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10226O88253 Gm5921-201ENSMUST00000075898 882 ntBASIC17.14■□□□□ 0.33
Gm10226O88253 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10226O88253 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm10226O88253 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm10226O88253 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Gm10226O88253 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10226O88253 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10226O88253 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10226O88253 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10226O88253 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10226O88253 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10226O88253 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10226O88253 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm10226O88253 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10226O88253 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10226O88253 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10226O88253 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10226O88253 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm10226O88253 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10226O88253 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Gm10226O88253 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10226O88253 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10226O88253 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm10226O88253 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10226O88253 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.11■□□□□ 0.33
Gm10226O88253 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10226O88253 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10226O88253 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10226O88253 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10226O88253 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10226O88253 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm10226O88253 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm10226O88253 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm10226O88253 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm10226O88253 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm10226O88253 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm10226O88253 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm10226O88253 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm10226O88253 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm10226O88253 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.08■□□□□ 0.32
Gm10226O88253 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10226O88253 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10226O88253 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10226O88253 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10226O88253 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10226O88253 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.07■□□□□ 0.32
Gm10226O88253 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm10226O88253 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10226O88253 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10226O88253 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm10226O88253 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10226O88253 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm10226O88253 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10226O88253 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10226O88253 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10226O88253 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms