Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SncaO55042 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SncaO55042 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SncaO55042 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SncaO55042 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SncaO55042 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.19■□□□□ 0.5
SncaO55042 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SncaO55042 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SncaO55042 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SncaO55042 Gm8503-201ENSMUST00000118131 455 ntBASIC18.18■□□□□ 0.5
SncaO55042 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.18■□□□□ 0.5
SncaO55042 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.18■□□□□ 0.5
SncaO55042 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.18■□□□□ 0.5
SncaO55042 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.18■□□□□ 0.5
SncaO55042 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SncaO55042 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SncaO55042 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SncaO55042 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SncaO55042 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SncaO55042 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.17■□□□□ 0.5
SncaO55042 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
SncaO55042 Gm4799-201ENSMUST00000095396 657 ntBASIC18.17■□□□□ 0.5
SncaO55042 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SncaO55042 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SncaO55042 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SncaO55042 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaO55042 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SncaO55042 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaO55042 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.16■□□□□ 0.5
SncaO55042 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaO55042 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaO55042 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SncaO55042 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SncaO55042 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SncaO55042 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SncaO55042 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SncaO55042 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SncaO55042 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.14■□□□□ 0.49
SncaO55042 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.14■□□□□ 0.49
SncaO55042 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaO55042 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaO55042 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.14■□□□□ 0.49
SncaO55042 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SncaO55042 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaO55042 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SncaO55042 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SncaO55042 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.13■□□□□ 0.49
SncaO55042 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaO55042 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SncaO55042 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SncaO55042 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaO55042 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaO55042 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaO55042 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SncaO55042 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SncaO55042 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.11■□□□□ 0.49
SncaO55042 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SncaO55042 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.11■□□□□ 0.49
SncaO55042 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaO55042 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaO55042 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaO55042 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaO55042 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaO55042 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SncaO55042 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SncaO55042 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SncaO55042 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaO55042 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.1■□□□□ 0.49
SncaO55042 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SncaO55042 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SncaO55042 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SncaO55042 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SncaO55042 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SncaO55042 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SncaO55042 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SncaO55042 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.09■□□□□ 0.49
SncaO55042 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SncaO55042 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SncaO55042 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SncaO55042 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SncaO55042 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SncaO55042 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SncaO55042 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SncaO55042 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SncaO55042 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SncaO55042 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SncaO55042 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.06■□□□□ 0.48
SncaO55042 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SncaO55042 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SncaO55042 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SncaO55042 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms