Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dkk1O54908 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dkk1O54908 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dkk1O54908 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dkk1O54908 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Dkk1O54908 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.05■□□□□ 0.64
Dkk1O54908 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.05■□□□□ 0.64
Dkk1O54908 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dkk1O54908 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dkk1O54908 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dkk1O54908 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.04■□□□□ 0.64
Dkk1O54908 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.04■□□□□ 0.64
Dkk1O54908 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Dkk1O54908 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dkk1O54908 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Dkk1O54908 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dkk1O54908 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dkk1O54908 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.03■□□□□ 0.64
Dkk1O54908 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.03■□□□□ 0.64
Dkk1O54908 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Dkk1O54908 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Dkk1O54908 Gm7332-201ENSMUST00000118351 454 ntBASIC19.02■□□□□ 0.64
Dkk1O54908 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.02■□□□□ 0.64
Dkk1O54908 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dkk1O54908 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dkk1O54908 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dkk1O54908 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dkk1O54908 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Dkk1O54908 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Dkk1O54908 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Dkk1O54908 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Dkk1O54908 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Dkk1O54908 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dkk1O54908 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19■□□□□ 0.63
Dkk1O54908 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dkk1O54908 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Dkk1O54908 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dkk1O54908 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dkk1O54908 Cap2-205ENSMUST00000225824 1634 ntBASIC19■□□□□ 0.63
Dkk1O54908 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Dkk1O54908 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dkk1O54908 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Dkk1O54908 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Dkk1O54908 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Dkk1O54908 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.99■□□□□ 0.63
Dkk1O54908 AC073947.1-201ENSMUST00000216991 649 ntBASIC18.99■□□□□ 0.63
Dkk1O54908 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.99■□□□□ 0.63
Dkk1O54908 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Dkk1O54908 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dkk1O54908 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.98■□□□□ 0.63
Dkk1O54908 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dkk1O54908 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Dkk1O54908 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dkk1O54908 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.98■□□□□ 0.63
Dkk1O54908 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.98■□□□□ 0.63
Dkk1O54908 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Dkk1O54908 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.98■□□□□ 0.63
Dkk1O54908 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dkk1O54908 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Dkk1O54908 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Dkk1O54908 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dkk1O54908 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Dkk1O54908 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dkk1O54908 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dkk1O54908 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Dkk1O54908 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dkk1O54908 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dkk1O54908 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dkk1O54908 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dkk1O54908 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dkk1O54908 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.96■□□□□ 0.63
Dkk1O54908 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dkk1O54908 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.96■□□□□ 0.63
Dkk1O54908 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dkk1O54908 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Dkk1O54908 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Dkk1O54908 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Dkk1O54908 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.95■□□□□ 0.62
Dkk1O54908 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Dkk1O54908 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Dkk1O54908 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC18.94■□□□□ 0.62
Dkk1O54908 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Dkk1O54908 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Dkk1O54908 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Dkk1O54908 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dkk1O54908 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dkk1O54908 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dkk1O54908 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.94■□□□□ 0.62
Dkk1O54908 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Dkk1O54908 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.93■□□□□ 0.62
Dkk1O54908 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Dkk1O54908 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms