Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
IDH3BO43837 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
IDH3BO43837 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
IDH3BO43837 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
IDH3BO43837 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
IDH3BO43837 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.07■■□□□ 1.12
IDH3BO43837 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
IDH3BO43837 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.07■■□□□ 1.12
IDH3BO43837 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
IDH3BO43837 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
IDH3BO43837 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
IDH3BO43837 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
IDH3BO43837 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
IDH3BO43837 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
IDH3BO43837 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
IDH3BO43837 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
IDH3BO43837 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.06■■□□□ 1.12
IDH3BO43837 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.06■■□□□ 1.12
IDH3BO43837 AC008813.1-201ENST00000536597 885 ntBASIC22.06■■□□□ 1.12
IDH3BO43837 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
IDH3BO43837 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
IDH3BO43837 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
IDH3BO43837 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
IDH3BO43837 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
IDH3BO43837 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
IDH3BO43837 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
IDH3BO43837 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
IDH3BO43837 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L13-201ENST00000554103 1267 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L15-201ENST00000611059 1267 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L23-201ENST00000615195 1269 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L24-201ENST00000617576 1269 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L22-201ENST00000618238 1269 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L20-201ENST00000619712 1269 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L21-201ENST00000622058 1269 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L10-201ENST00000622460 1267 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 DUX4L25-201ENST00000624915 1269 ntBASIC22.05■■□□□ 1.12
IDH3BO43837 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
IDH3BO43837 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
IDH3BO43837 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
IDH3BO43837 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
IDH3BO43837 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IDH3BO43837 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
IDH3BO43837 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
IDH3BO43837 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.04■■□□□ 1.12
IDH3BO43837 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
IDH3BO43837 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.04■■□□□ 1.12
IDH3BO43837 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IDH3BO43837 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IDH3BO43837 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
IDH3BO43837 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
IDH3BO43837 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
IDH3BO43837 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
IDH3BO43837 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
IDH3BO43837 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
IDH3BO43837 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
IDH3BO43837 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.03■■□□□ 1.12
IDH3BO43837 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.02■■□□□ 1.12
IDH3BO43837 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
IDH3BO43837 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.02■■□□□ 1.12
IDH3BO43837 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IDH3BO43837 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
IDH3BO43837 RPS2P35-201ENST00000443417 897 ntBASIC22.01■■□□□ 1.11
IDH3BO43837 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IDH3BO43837 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.01■■□□□ 1.11
IDH3BO43837 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IDH3BO43837 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
IDH3BO43837 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22■■□□□ 1.11
IDH3BO43837 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
IDH3BO43837 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IDH3BO43837 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
IDH3BO43837 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
IDH3BO43837 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.99■■□□□ 1.11
IDH3BO43837 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
IDH3BO43837 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
IDH3BO43837 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
IDH3BO43837 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IDH3BO43837 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.98■■□□□ 1.11
IDH3BO43837 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IDH3BO43837 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IDH3BO43837 AC148477.6-201ENST00000623746 465 ntBASIC21.98■■□□□ 1.11
IDH3BO43837 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
IDH3BO43837 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.98■■□□□ 1.11
IDH3BO43837 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
IDH3BO43837 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
IDH3BO43837 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.98■■□□□ 1.11
IDH3BO43837 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IDH3BO43837 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
IDH3BO43837 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
IDH3BO43837 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms