Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Col15a1O35206 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Col15a1O35206 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Col15a1O35206 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col15a1O35206 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Col15a1O35206 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Col15a1O35206 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Col15a1O35206 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Col15a1O35206 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Col15a1O35206 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Col15a1O35206 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col15a1O35206 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC29.13■■■□□ 2.25
Col15a1O35206 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col15a1O35206 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col15a1O35206 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col15a1O35206 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Col15a1O35206 Gm10232-201ENSMUST00000089221 720 ntBASIC29.13■■■□□ 2.25
Col15a1O35206 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Col15a1O35206 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Col15a1O35206 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Col15a1O35206 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
Col15a1O35206 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
Col15a1O35206 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col15a1O35206 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC29.1■■■□□ 2.25
Col15a1O35206 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC29.1■■■□□ 2.25
Col15a1O35206 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col15a1O35206 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC29.09■■■□□ 2.25
Col15a1O35206 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Col15a1O35206 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col15a1O35206 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col15a1O35206 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col15a1O35206 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col15a1O35206 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC29.04■■■□□ 2.24
Col15a1O35206 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
Col15a1O35206 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
Col15a1O35206 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Col15a1O35206 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Col15a1O35206 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Col15a1O35206 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC29.02■■■□□ 2.24
Col15a1O35206 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC29.02■■■□□ 2.24
Col15a1O35206 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Col15a1O35206 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC29.01■■■□□ 2.24
Col15a1O35206 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC29.01■■■□□ 2.24
Col15a1O35206 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC29.01■■■□□ 2.24
Col15a1O35206 Etf1-202ENSMUST00000180351 108 ntBASIC29.01■■■□□ 2.23
Col15a1O35206 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Col15a1O35206 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
Col15a1O35206 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col15a1O35206 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col15a1O35206 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC29■■■□□ 2.23
Col15a1O35206 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col15a1O35206 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Col15a1O35206 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Col15a1O35206 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col15a1O35206 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC28.99■■■□□ 2.23
Col15a1O35206 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col15a1O35206 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Col15a1O35206 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC28.98■■■□□ 2.23
Col15a1O35206 Gm5131-201ENSMUST00000212776 1238 ntBASIC28.98■■■□□ 2.23
Col15a1O35206 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Col15a1O35206 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col15a1O35206 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col15a1O35206 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Col15a1O35206 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC28.97■■■□□ 2.23
Col15a1O35206 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col15a1O35206 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col15a1O35206 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC28.96■■■□□ 2.23
Col15a1O35206 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC28.96■■■□□ 2.23
Col15a1O35206 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col15a1O35206 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Col15a1O35206 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col15a1O35206 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col15a1O35206 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Col15a1O35206 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
Col15a1O35206 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Col15a1O35206 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Col15a1O35206 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col15a1O35206 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Col15a1O35206 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC28.94■■■□□ 2.22
Col15a1O35206 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col15a1O35206 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Col15a1O35206 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col15a1O35206 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Col15a1O35206 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC28.93■■■□□ 2.22
Col15a1O35206 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Col15a1O35206 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC28.93■■■□□ 2.22
Col15a1O35206 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC28.93■■■□□ 2.22
Col15a1O35206 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC28.93■■■□□ 2.22
Col15a1O35206 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
Col15a1O35206 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col15a1O35206 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Col15a1O35206 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC28.92■■■□□ 2.22
Col15a1O35206 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC28.92■■■□□ 2.22
Col15a1O35206 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Col15a1O35206 Gm16464-201ENSMUST00000117815 1095 ntBASIC28.91■■■□□ 2.22
Col15a1O35206 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Col15a1O35206 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Col15a1O35206 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Col15a1O35206 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col15a1O35206 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC28.9■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms