Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Alx4O35137 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.75■□□□□ 0.75
Alx4O35137 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.75■□□□□ 0.75
Alx4O35137 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx4O35137 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx4O35137 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.74■□□□□ 0.75
Alx4O35137 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx4O35137 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Alx4O35137 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx4O35137 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx4O35137 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx4O35137 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx4O35137 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.73■□□□□ 0.75
Alx4O35137 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Alx4O35137 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Alx4O35137 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx4O35137 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx4O35137 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx4O35137 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Alx4O35137 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.71■□□□□ 0.75
Alx4O35137 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.71■□□□□ 0.75
Alx4O35137 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx4O35137 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Alx4O35137 Gm22567-201ENSMUST00000175542 342 ntBASIC19.71■□□□□ 0.75
Alx4O35137 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.71■□□□□ 0.75
Alx4O35137 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx4O35137 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx4O35137 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Alx4O35137 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Alx4O35137 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Alx4O35137 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.7■□□□□ 0.74
Alx4O35137 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx4O35137 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx4O35137 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Alx4O35137 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx4O35137 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx4O35137 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Alx4O35137 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Alx4O35137 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Alx4O35137 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx4O35137 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx4O35137 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx4O35137 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx4O35137 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx4O35137 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx4O35137 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx4O35137 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.68■□□□□ 0.74
Alx4O35137 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx4O35137 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx4O35137 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.67■□□□□ 0.74
Alx4O35137 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.67■□□□□ 0.74
Alx4O35137 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx4O35137 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alx4O35137 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.67■□□□□ 0.74
Alx4O35137 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alx4O35137 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx4O35137 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Alx4O35137 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Alx4O35137 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Alx4O35137 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.65■□□□□ 0.74
Alx4O35137 Gm9812-201ENSMUST00000061934 968 ntBASIC19.65■□□□□ 0.74
Alx4O35137 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx4O35137 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Alx4O35137 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.64■□□□□ 0.73
Alx4O35137 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Alx4O35137 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx4O35137 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.63■□□□□ 0.73
Alx4O35137 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx4O35137 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx4O35137 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx4O35137 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.63■□□□□ 0.73
Alx4O35137 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx4O35137 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx4O35137 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx4O35137 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Alx4O35137 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx4O35137 Gm4799-201ENSMUST00000095396 657 ntBASIC19.62■□□□□ 0.73
Alx4O35137 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx4O35137 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Alx4O35137 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx4O35137 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx4O35137 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Alx4O35137 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.61■□□□□ 0.73
Alx4O35137 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx4O35137 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Alx4O35137 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.61■□□□□ 0.73
Alx4O35137 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.61■□□□□ 0.73
Alx4O35137 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx4O35137 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.6■□□□□ 0.73
Alx4O35137 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx4O35137 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.6■□□□□ 0.73
Alx4O35137 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx4O35137 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.6■□□□□ 0.73
Alx4O35137 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx4O35137 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx4O35137 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.59■□□□□ 0.73
Alx4O35137 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Alx4O35137 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.58■□□□□ 0.73
Alx4O35137 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Alx4O35137 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms