Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXN1O15353 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.31■■■□□ 2.28
FOXN1O15353 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
FOXN1O15353 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
FOXN1O15353 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
FOXN1O15353 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.3■■■□□ 2.28
FOXN1O15353 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.3■■■□□ 2.28
FOXN1O15353 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
FOXN1O15353 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.29■■■□□ 2.28
FOXN1O15353 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.29■■■□□ 2.28
FOXN1O15353 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.29■■■□□ 2.28
FOXN1O15353 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
FOXN1O15353 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
FOXN1O15353 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
FOXN1O15353 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
FOXN1O15353 RARRES2P6-201ENST00000567333 442 ntBASIC29.28■■■□□ 2.28
FOXN1O15353 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
FOXN1O15353 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.27■■■□□ 2.28
FOXN1O15353 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.27■■■□□ 2.28
FOXN1O15353 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
FOXN1O15353 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
FOXN1O15353 AC127502.1-201ENST00000399971 1502 ntBASIC29.26■■■□□ 2.27
FOXN1O15353 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
FOXN1O15353 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.26■■■□□ 2.27
FOXN1O15353 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.26■■■□□ 2.27
FOXN1O15353 AC018755.3-202ENST00000596210 929 ntBASIC29.26■■■□□ 2.27
FOXN1O15353 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.26■■■□□ 2.27
FOXN1O15353 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
FOXN1O15353 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
FOXN1O15353 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
FOXN1O15353 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.25■■■□□ 2.27
FOXN1O15353 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
FOXN1O15353 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
FOXN1O15353 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.24■■■□□ 2.27
FOXN1O15353 DRD5P2-201ENST00000421395 2012 ntBASIC29.24■■■□□ 2.27
FOXN1O15353 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.24■■■□□ 2.27
FOXN1O15353 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
FOXN1O15353 AC005837.3-201ENST00000612163 286 ntBASIC29.24■■■□□ 2.27
FOXN1O15353 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.23■■■□□ 2.27
FOXN1O15353 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
FOXN1O15353 TK2-216ENST00000564917 1156 ntTSL 3 BASIC29.23■■■□□ 2.27
FOXN1O15353 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
FOXN1O15353 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.22■■■□□ 2.27
FOXN1O15353 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.22■■■□□ 2.27
FOXN1O15353 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
FOXN1O15353 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
FOXN1O15353 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC29.21■■■□□ 2.27
FOXN1O15353 AC104564.3-201ENST00000582367 638 ntBASIC29.21■■■□□ 2.27
FOXN1O15353 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
FOXN1O15353 LONRF2P2-201ENST00000439212 571 ntBASIC29.2■■■□□ 2.26
FOXN1O15353 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
FOXN1O15353 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
FOXN1O15353 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
FOXN1O15353 AC142086.6-201ENST00000621154 1765 ntBASIC29.19■■■□□ 2.26
FOXN1O15353 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.19■■■□□ 2.26
FOXN1O15353 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.19■■■□□ 2.26
FOXN1O15353 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
FOXN1O15353 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.19■■■□□ 2.26
FOXN1O15353 UNC93B8-201ENST00000511903 705 ntBASIC29.19■■■□□ 2.26
FOXN1O15353 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
FOXN1O15353 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.19■■■□□ 2.26
FOXN1O15353 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
FOXN1O15353 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.19■■■□□ 2.26
FOXN1O15353 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.19■■■□□ 2.26
FOXN1O15353 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
FOXN1O15353 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
FOXN1O15353 MTX2-204ENST00000443241 799 ntTSL 3 BASIC29.18■■■□□ 2.26
FOXN1O15353 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC29.18■■■□□ 2.26
FOXN1O15353 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
FOXN1O15353 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
FOXN1O15353 KRT16P3-201ENST00000439127 1283 ntBASIC29.17■■■□□ 2.26
FOXN1O15353 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
FOXN1O15353 AC110285.6-201ENST00000617652 491 ntBASIC29.17■■■□□ 2.26
FOXN1O15353 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
FOXN1O15353 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
FOXN1O15353 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
FOXN1O15353 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
FOXN1O15353 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.16■■■□□ 2.26
FOXN1O15353 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.15■■■□□ 2.26
FOXN1O15353 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
FOXN1O15353 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.15■■■□□ 2.26
FOXN1O15353 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
FOXN1O15353 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.14■■■□□ 2.26
FOXN1O15353 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.14■■■□□ 2.26
FOXN1O15353 MIR4787-201ENST00000607364 84 ntBASIC29.14■■■□□ 2.26
FOXN1O15353 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
FOXN1O15353 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.14■■■□□ 2.25
FOXN1O15353 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
FOXN1O15353 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.13■■■□□ 2.25
FOXN1O15353 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
FOXN1O15353 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
FOXN1O15353 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
FOXN1O15353 KRT125P-201ENST00000546827 989 ntBASIC29.12■■■□□ 2.25
FOXN1O15353 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.12■■■□□ 2.25
FOXN1O15353 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
FOXN1O15353 AC026271.2-201ENST00000428091 497 ntBASIC29.11■■■□□ 2.25
FOXN1O15353 AC131281.2-201ENST00000520478 145 ntBASIC29.11■■■□□ 2.25
FOXN1O15353 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.11■■■□□ 2.25
FOXN1O15353 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
FOXN1O15353 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms