Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMAD9O15198 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.95■■□□□ 1.1
SMAD9O15198 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.95■■□□□ 1.1
SMAD9O15198 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMAD9O15198 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SMAD9O15198 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.94■■□□□ 1.1
SMAD9O15198 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.94■■□□□ 1.1
SMAD9O15198 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.94■■□□□ 1.1
SMAD9O15198 SMPD5-203ENST00000639008 1464 ntBASIC21.94■■□□□ 1.1
SMAD9O15198 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMAD9O15198 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
SMAD9O15198 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMAD9O15198 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMAD9O15198 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMAD9O15198 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.93■■□□□ 1.1
SMAD9O15198 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SMAD9O15198 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMAD9O15198 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMAD9O15198 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD9O15198 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD9O15198 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD9O15198 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.92■■□□□ 1.1
SMAD9O15198 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.92■■□□□ 1.1
SMAD9O15198 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD9O15198 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD9O15198 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
SMAD9O15198 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD9O15198 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD9O15198 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMAD9O15198 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.91■■□□□ 1.1
SMAD9O15198 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
SMAD9O15198 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD9O15198 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD9O15198 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD9O15198 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD9O15198 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD9O15198 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD9O15198 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD9O15198 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD9O15198 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD9O15198 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.9■■□□□ 1.1
SMAD9O15198 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.9■■□□□ 1.1
SMAD9O15198 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.89■■□□□ 1.1
SMAD9O15198 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.89■■□□□ 1.09
SMAD9O15198 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMAD9O15198 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.89■■□□□ 1.09
SMAD9O15198 AC007029.1-201ENST00000604183 313 ntBASIC21.89■■□□□ 1.09
SMAD9O15198 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD9O15198 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD9O15198 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD9O15198 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD9O15198 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD9O15198 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD9O15198 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD9O15198 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMAD9O15198 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMAD9O15198 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMAD9O15198 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.87■■□□□ 1.09
SMAD9O15198 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD9O15198 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SMAD9O15198 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.86■■□□□ 1.09
SMAD9O15198 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD9O15198 MIR3960-201ENST00000583311 91 ntBASIC21.86■■□□□ 1.09
SMAD9O15198 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD9O15198 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
SMAD9O15198 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SMAD9O15198 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.86■■□□□ 1.09
SMAD9O15198 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.85■■□□□ 1.09
SMAD9O15198 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMAD9O15198 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.85■■□□□ 1.09
SMAD9O15198 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMAD9O15198 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD9O15198 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD9O15198 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD9O15198 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.84■■□□□ 1.09
SMAD9O15198 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMAD9O15198 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD9O15198 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD9O15198 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD9O15198 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SMAD9O15198 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD9O15198 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.83■■□□□ 1.09
SMAD9O15198 RP9P-202ENST00000450133 1212 ntBASIC21.83■■□□□ 1.09
SMAD9O15198 ABHD17AP5-201ENST00000580133 923 ntBASIC21.83■■□□□ 1.09
SMAD9O15198 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SMAD9O15198 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.83■■□□□ 1.08
SMAD9O15198 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SMAD9O15198 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
SMAD9O15198 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMAD9O15198 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.82■■□□□ 1.08
SMAD9O15198 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMAD9O15198 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.82■■□□□ 1.08
SMAD9O15198 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMAD9O15198 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
SMAD9O15198 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMAD9O15198 AC093536.1-201ENST00000569153 554 ntBASIC21.81■■□□□ 1.08
SMAD9O15198 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.81■■□□□ 1.08
SMAD9O15198 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.8■■□□□ 1.08
SMAD9O15198 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD9O15198 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms